miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34158_ssc-mir-4334:mirbase
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 ctgtgctgagccctggagtgacgggggtgaaagggcagagtccctgtcctccaggagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgtgctgagccctggagtgacgggggtgaaagggcagagtccctgtcctccaggagctc 60
Query: 61 cccatgtgg 69
|||||||||
Sbjct: 61 cccatgtgg 69
>32857_rno-mir-339:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 gtccctgtcctccaggagctc 60
|||||||||||||||||||||
Sbjct: 15 gtccctgtcctccaggagctc 35
>32858_rno-mir-339:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 gtccctgtcctccaggagctc 60
|||||||||||||||||||||
Sbjct: 15 gtccctgtcctccaggagctc 35
>33327_bta-mir-339:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 gtccctgtcctccaggagctc 60
|||||||||||||||||||||
Sbjct: 13 gtccctgtcctccaggagctc 33
>33328_bta-mir-339b:mirbase
Length = 58
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 41 tccctgtcctccaggagctcc 61
|||||||||||||||||||||
Sbjct: 1 tccctgtcctccaggagctcc 21
>34062_ssc-mir-339:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 gtccctgtcctccaggagctc 60
|||||||||||||||||||||
Sbjct: 10 gtccctgtcctccaggagctc 30
>34063_ssc-mir-339:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 40 gtccctgtcctccaggagctc 60
|||||||||||||||||||||
Sbjct: 10 gtccctgtcctccaggagctc 30
>27852_mml-mir-339:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tccctgtcctccaggagctc 60
||||||||||||||||||||
Sbjct: 15 tccctgtcctccaggagctc 34
>27853_mml-mir-339:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tccctgtcctccaggagctc 60
||||||||||||||||||||
Sbjct: 15 tccctgtcctccaggagctc 34
>28589_hsa-mir-339:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tccctgtcctccaggagctc 60
||||||||||||||||||||
Sbjct: 15 tccctgtcctccaggagctc 34
>28590_hsa-mir-339:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tccctgtcctccaggagctc 60
||||||||||||||||||||
Sbjct: 15 tccctgtcctccaggagctc 34
>30335_ptr-mir-339:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tccctgtcctccaggagctc 60
||||||||||||||||||||
Sbjct: 15 tccctgtcctccaggagctc 34
>30957_ppy-mir-339:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tccctgtcctccaggagctc 60
||||||||||||||||||||
Sbjct: 15 tccctgtcctccaggagctc 34
>32006_mmu-mir-339:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tccctgtcctccaggagctc 60
||||||||||||||||||||
Sbjct: 16 tccctgtcctccaggagctc 35
>32007_mmu-mir-339:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 41 tccctgtcctccaggagctc 60
||||||||||||||||||||
Sbjct: 16 tccctgtcctccaggagctc 35
