miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34533_fru-let-7i:mirbase
Length = 84
Score = 131 bits (66), Expect = 1e-31
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 6 ctggctgaggtagtagtttgtgctgttggttgggatgtgacattgcccgttatggagatg 65
|||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60
Query: 66 actgcgcaagctactcccttgc 87
||||||||||||||| ||||||
Sbjct: 61 actgcgcaagctactgccttgc 82
>34681_tni-let-7i:mirbase
Length = 84
Score = 131 bits (66), Expect = 1e-31
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 6 ctggctgaggtagtagtttgtgctgttggttgggatgtgacattgcccgttatggagatg 65
|||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggttgggttgtgacactgcccgctatggagatg 60
Query: 66 actgcgcaagctactcccttgc 87
||||||||||||||| ||||||
Sbjct: 61 actgcgcaagctactgccttgc 82
>26387_tgu-let-7i:mirbase
Length = 92
Score = 117 bits (59), Expect = 1e-27
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 6 ctggctgaggtagtagtttgtgctgttggttgggatgtgacattgcccgttatggagatg 65
|||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||
Sbjct: 6 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 65
Query: 66 actgcgcaagctactcccttgccagtg 92
||||||||||||||| |||||| ||||
Sbjct: 66 actgcgcaagctactgccttgctagtg 92
>25876_gga-let-7i:mirbase
Length = 84
Score = 115 bits (58), Expect = 6e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 6 ctggctgaggtagtagtttgtgctgttggttgggatgtgacattgcccgttatggagatg 65
|||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 66 actgcgcaagctactcccttgc 87
||||||||||||||| ||||||
Sbjct: 61 actgcgcaagctactgccttgc 82
>27326_mdo-let-7i:mirbase
Length = 84
Score = 115 bits (58), Expect = 6e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 6 ctggctgaggtagtagtttgtgctgttggttgggatgtgacattgcccgttatggagatg 65
|||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 66 actgcgcaagctactcccttgc 87
||||||||||||||| ||||||
Sbjct: 61 actgcgcaagctactgccttgc 82
>27639_mml-let-7i:mirbase
Length = 85
Score = 115 bits (58), Expect = 6e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 6 ctggctgaggtagtagtttgtgctgttggttgggatgtgacattgcccgttatggagatg 65
|||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 66 actgcgcaagctactcccttgc 87
||||||||||||||| ||||||
Sbjct: 61 actgcgcaagctactgccttgc 82
>28349_hsa-let-7i:mirbase
Length = 84
Score = 115 bits (58), Expect = 6e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 6 ctggctgaggtagtagtttgtgctgttggttgggatgtgacattgcccgttatggagatg 65
|||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 66 actgcgcaagctactcccttgc 87
||||||||||||||| ||||||
Sbjct: 61 actgcgcaagctactgccttgc 82
>30136_ptr-let-7i:mirbase
Length = 83
Score = 115 bits (58), Expect = 6e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 6 ctggctgaggtagtagtttgtgctgttggttgggatgtgacattgcccgttatggagatg 65
|||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 66 actgcgcaagctactcccttgc 87
||||||||||||||| ||||||
Sbjct: 61 actgcgcaagctactgccttgc 82
>30741_ppy-let-7i:mirbase
Length = 84
Score = 115 bits (58), Expect = 6e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 6 ctggctgaggtagtagtttgtgctgttggttgggatgtgacattgcccgttatggagatg 65
|||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 66 actgcgcaagctactcccttgc 87
||||||||||||||| ||||||
Sbjct: 61 actgcgcaagctactgccttgc 82
>31762_mmu-let-7i:mirbase
Length = 85
Score = 115 bits (58), Expect = 6e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 6 ctggctgaggtagtagtttgtgctgttggttgggatgtgacattgcccgttatggagatg 65
|||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 66 actgcgcaagctactcccttgc 87
||||||||||||||| ||||||
Sbjct: 61 actgcgcaagctactgccttgc 82
>32647_rno-let-7i:mirbase
Length = 85
Score = 115 bits (58), Expect = 6e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 6 ctggctgaggtagtagtttgtgctgttggttgggatgtgacattgcccgttatggagatg 65
|||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 66 actgcgcaagctactcccttgc 87
||||||||||||||| ||||||
Sbjct: 61 actgcgcaagctactgccttgc 82
>33118_bta-let-7i:mirbase
Length = 84
Score = 115 bits (58), Expect = 6e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 6 ctggctgaggtagtagtttgtgctgttggttgggatgtgacattgcccgttatggagatg 65
|||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 66 actgcgcaagctactcccttgc 87
||||||||||||||| ||||||
Sbjct: 61 actgcgcaagctactgccttgc 82
>33904_ssc-let-7i:mirbase
Length = 85
Score = 115 bits (58), Expect = 6e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 6 ctggctgaggtagtagtttgtgctgttggttgggatgtgacattgcccgttatggagatg 65
|||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacattgcccgctgtggagata 60
Query: 66 actgcgcaagctactcccttgc 87
||||||||||||||| ||||||
Sbjct: 61 actgcgcaagctactgccttgc 82
>25683_xtr-let-7i:mirbase
Length = 85
Score = 107 bits (54), Expect = 1e-24
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 6 ctggctgaggtagtagtttgtgctgttggttgggatgtgacattgcccgttatggagatg 65
|||||||||||||||||||||||||||||| ||| ||||||| |||||| | |||||||
Sbjct: 1 ctggctgaggtagtagtttgtgctgttggtcgggttgtgacactgcccgctgtggagata 60
Query: 66 actgcgcaagctactcccttgc 87
||||||||||||||| ||||||
Sbjct: 61 actgcgcaagctactgccttgc 82
>25677_xtr-let-7b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 ctggctgaggtagtagtttgtg 27
||||||||||||||||||||||
Sbjct: 1 ctggctgaggtagtagtttgtg 22
