miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34540_fru-mir-9-4:mirbase
Length = 85
Score = 153 bits (77), Expect = 2e-38
Identities = 83/85 (97%)
Strand = Plus / Plus
Query: 2 gggttagtttttctctttggttatctagctgtatgagtttatgtgatatcataaagctag 61
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gggttagtttttatctttggttatctagctgtatgagtttatgtaatatcataaagctag 60
Query: 62 agaaccgaatgtataaactaattcc 86
|||||||||||||||||||||||||
Sbjct: 61 agaaccgaatgtataaactaattcc 85
>34688_tni-mir-9-4:mirbase
Length = 85
Score = 145 bits (73), Expect = 6e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 2 gggttagtttttctctttggttatctagctgtatgagtttatgtgatatcataaagctag 61
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gggttagtttttatctttggttatctagctgtatgagtttatgtaatatcataaagctag 60
Query: 62 agaaccgaatgtataaactaattcc 86
||||||||||||| |||||||||||
Sbjct: 61 agaaccgaatgtacaaactaattcc 85
>25887_gga-mir-9-1:mirbase
Length = 88
Score = 133 bits (67), Expect = 2e-32
Identities = 76/79 (96%)
Strand = Plus / Plus
Query: 1 tgggttagtttttctctttggttatctagctgtatgagtttatgtgatatcataaagcta 60
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2 tgggttggtttttctctttggttatctagctgtatgagtgtatgtgatatcataaagcta 61
Query: 61 gagaaccgaatgtataaac 79
|||||||||||||| ||||
Sbjct: 62 gagaaccgaatgtaaaaac 80
>34196_dre-mir-9-7:mirbase
Length = 84
Score = 111 bits (56), Expect = 8e-26
Identities = 75/80 (93%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 2 gggttagtttttctctttggttatctagctgtatgagtttatgtgatatcataaagctag 61
||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 1 gggttagtttttctctttggttatctagctgtatgag-ttatgaaatatcataaagctag 59
Query: 62 agaaccgaatgtataaacta 81
||||||||| ||| ||||||
Sbjct: 60 agaaccgaaagtagaaacta 79
>31421_oan-mir-9-1:mirbase
Length = 122
Score = 105 bits (53), Expect = 5e-24
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 30 tctttggttatctagctgtatgagtgtatgtgatgtcataaagctagagaaccgaatgta 89
Query: 75 taaac 79
||||
Sbjct: 90 aaaac 94
>25692_xtr-mir-9a-2:mirbase
Length = 85
Score = 67.9 bits (34), Expect = 1e-12
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| ||| | | ||||||||||||| ||||||| |||
Sbjct: 15 tctttggttatctagctgtatgagtgtattggttttcataaagctagataaccgaaagta 74
Query: 75 taaact 80
|||||
Sbjct: 75 aaaact 80
>25693_xtr-mir-9b:mirbase
Length = 74
Score = 65.9 bits (33), Expect = 4e-12
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
|||||||||| |||||||||||||| || | || ||||||||||||| ||||||| |||
Sbjct: 8 tctttggttacctagctgtatgagtataactaatgtcataaagctagacaaccgaacgta 67
Query: 75 taaac 79
|||||
Sbjct: 68 taaac 72
>27329_mdo-mir-9-1:mirbase
Length = 90
Score = 65.9 bits (33), Expect = 4e-12
Identities = 59/65 (90%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 8 gtttttctctttggttatctagctgtatgagt-tta-tgtgatatcataaagctagagaa 65
|||| ||||||||||||||||||||||||||| ||| || | ||||||||||||||| ||
Sbjct: 9 gtttctctctttggttatctagctgtatgagtgttattgagctatcataaagctagataa 68
Query: 66 ccgaa 70
|||||
Sbjct: 69 ccgaa 73
>34865_sko-mir-9:mirbase
Length = 79
Score = 63.9 bits (32), Expect = 2e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 10 ttttctctttggttatctagctgtatgagtttatgtgatatcataaagctag 61
|||||||||||||||||||||||||||||| || ||| || ||||||||||
Sbjct: 7 ttttctctttggttatctagctgtatgagtgtacatgacattataaagctag 58
>34872_sko-mir-79:mirbase
Length = 101
Score = 63.9 bits (32), Expect = 2e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 10 ttttctctttggttatctagctgtatgagtttatgtgatatcataaagctag 61
|||||||||||||||||||||||||||||| || ||| || ||||||||||
Sbjct: 19 ttttctctttggttatctagctgtatgagtgtacatgacattataaagctag 70
>34192_dre-mir-9-3:mirbase
Length = 101
Score = 61.9 bits (31), Expect = 7e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 2 gggttagtttttctctttggttatctagctgtatgagtt 40
||||| |||| ||||||||||||||||||||||||||||
Sbjct: 6 gggttggtttctctctttggttatctagctgtatgagtt 44
>26942_eca-mir-9a-2:mirbase
Length = 78
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| |||
Sbjct: 10 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 69
Query: 75 taaact 80
|||||
Sbjct: 70 aaaact 75
>27330_mdo-mir-9-2:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 75 taaact 80
|||||
Sbjct: 76 aaaact 81
>27476_age-mir-9:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 75 taaact 80
|||||
Sbjct: 76 aaaact 81
>27538_lla-mir-9:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 75 taaact 80
|||||
Sbjct: 76 aaaact 81
>27646_mml-mir-9-2:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 75 taaact 80
|||||
Sbjct: 76 aaaact 81
>28168_mne-mir-9:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 75 taaact 80
|||||
Sbjct: 76 aaaact 81
>28255_ggo-mir-9:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 75 taaact 80
|||||
Sbjct: 76 aaaact 81
>28356_hsa-mir-9-2:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 75 taaact 80
|||||
Sbjct: 76 aaaact 81
>30143_ptr-mir-9-2:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 75 taaact 80
|||||
Sbjct: 76 aaaact 81
>30747_ppy-mir-9-2:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 75 taaact 80
|||||
Sbjct: 76 aaaact 81
>32653_rno-mir-9-2:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 75 taaact 80
|||||
Sbjct: 76 aaaact 81
>33104_rno-mir-3597-2:mirbase
Length = 118
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| |||
Sbjct: 90 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 31
Query: 75 taaact 80
|||||
Sbjct: 30 aaaact 25
>33105_rno-mir-3597-2:mirbase
Length = 118
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| |||
Sbjct: 90 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 31
Query: 75 taaact 80
|||||
Sbjct: 30 aaaact 25
>33125_bta-mir-9-2:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 75 taaact 80
|||||
Sbjct: 76 aaaact 81
>33908_ssc-mir-9-2:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 75
Query: 75 taaact 80
|||||
Sbjct: 76 aaaact 81
>34808_spu-mir-9:mirbase
Length = 101
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 10 ttttctctttggttatctagctgtatgagt 39
||||||||||||||||||||||||||||||
Sbjct: 16 ttttctctttggttatctagctgtatgagt 45
>34817_spu-mir-79:mirbase
Length = 101
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 10 ttttctctttggttatctagctgtatgagt 39
||||||||||||||||||||||||||||||
Sbjct: 17 ttttctctttggttatctagctgtatgagt 46
>38743_cte-mir-79:mirbase
Length = 101
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 9 tttttctctttggttatctagctgtatga 37
|||||||||||||||||||||||||||||
Sbjct: 17 tttttctctttggttatctagctgtatga 45
>38729_cte-mir-9:mirbase
Length = 101
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 9 tttttctctttggttatctagctgtatga 37
|||||||||||||||||||||||||||||
Sbjct: 15 tttttctctttggttatctagctgtatga 43
>31771_mmu-mir-9-2:mirbase
Length = 72
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| |||
Sbjct: 8 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaaagta 67
Query: 75 taaac 79
||||
Sbjct: 68 aaaac 72
>26619_cfa-mir-9-2:mirbase
Length = 60
Score = 56.0 bits (28), Expect = 4e-09
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaa 70
||||||||||||||||||||||||| ||| | ||||||||||||| |||||||
Sbjct: 1 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaa 56
>27647_mml-mir-9-3:mirbase
Length = 90
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 8 gtttttctctttggttatctagctgtatgagt 39
|||| |||||||||||||||||||||||||||
Sbjct: 9 gtttctctctttggttatctagctgtatgagt 40
>28357_hsa-mir-9-3:mirbase
Length = 90
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 8 gtttttctctttggttatctagctgtatgagt 39
|||| |||||||||||||||||||||||||||
Sbjct: 9 gtttctctctttggttatctagctgtatgagt 40
>30748_ppy-mir-9-3:mirbase
Length = 90
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 8 gtttttctctttggttatctagctgtatgagt 39
|||| |||||||||||||||||||||||||||
Sbjct: 9 gtttctctctttggttatctagctgtatgagt 40
>31422_oan-mir-9-2:mirbase
Length = 68
Score = 56.0 bits (28), Expect = 4e-09
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaa 70
||||||||||||||||||||||||| ||| | ||||||||||||| |||||||
Sbjct: 8 tctttggttatctagctgtatgagtgtattggtcttcataaagctagataaccgaa 63
>31772_mmu-mir-9-3:mirbase
Length = 90
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 8 gtttttctctttggttatctagctgtatgagt 39
|||| |||||||||||||||||||||||||||
Sbjct: 9 gtttctctctttggttatctagctgtatgagt 40
>32654_rno-mir-9-3:mirbase
Length = 90
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 8 gtttttctctttggttatctagctgtatgagt 39
|||| |||||||||||||||||||||||||||
Sbjct: 9 gtttctctctttggttatctagctgtatgagt 40
>33106_rno-mir-3597-3:mirbase
Length = 115
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 8 gtttttctctttggttatctagctgtatgagt 39
|||| |||||||||||||||||||||||||||
Sbjct: 96 gtttctctctttggttatctagctgtatgagt 65
>33107_rno-mir-3597-3:mirbase
Length = 115
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 8 gtttttctctttggttatctagctgtatgagt 39
|||| |||||||||||||||||||||||||||
Sbjct: 96 gtttctctctttggttatctagctgtatgagt 65
>33124_bta-mir-9-1:mirbase
Length = 90
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 8 gtttttctctttggttatctagctgtatgagt 39
|||| |||||||||||||||||||||||||||
Sbjct: 9 gtttctctctttggttatctagctgtatgagt 40
>34195_dre-mir-9-6:mirbase
Length = 88
Score = 56.0 bits (28), Expect = 4e-09
Identities = 58/67 (86%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatga--gtttatgtgatatcataaagctagagaaccgaatg 72
||||||||||||||||||||||| |||||| || ||||||||||||| ||||||| |
Sbjct: 15 tctttggttatctagctgtatgagtgtttatctgccttcataaagctagataaccgaaag 74
Query: 73 tataaac 79
|| ||||
Sbjct: 75 tagaaac 81
>35172_aae-mir-9a-1:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 12 ttctctttggttatctagctgtatgagt 39
||||||||||||||||||||||||||||
Sbjct: 8 ttctctttggttatctagctgtatgagt 35
>35173_aae-mir-9a-2:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 12 ttctctttggttatctagctgtatgagt 39
||||||||||||||||||||||||||||
Sbjct: 8 ttctctttggttatctagctgtatgagt 35
>35275_aga-mir-9a:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 12 ttctctttggttatctagctgtatgagt 39
||||||||||||||||||||||||||||
Sbjct: 8 ttctctttggttatctagctgtatgagt 35
>35345_ame-mir-9a:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 4e-09
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt-ttatgtgatatcataaagctag 61
||||||||||||||||||||||||| |||| || |||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagtattattcgacatcataaagctag 62
>37571_ngi-mir-9a:mirbase
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagttt 41
|||||||||||||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagttt 41
>37603_nlo-mir-9a:mirbase
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagttt 41
|||||||||||||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagttt 41
>37636_nvi-mir-9a:mirbase
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagttt 41
|||||||||||||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagttt 41
>38861_lgi-mir-79:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 8 gtttttctctttggttatctagctgtatga 37
|||||| |||||||||||||||||||||||
Sbjct: 15 gtttttgtctttggttatctagctgtatga 44
>38852_lgi-mir-9:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 8 gtttttctctttggttatctagctgtatga 37
|||||| |||||||||||||||||||||||
Sbjct: 14 gtttttgtctttggttatctagctgtatga 43
>25691_xtr-mir-9a-1:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 2 gggttagtttttctctttggttatctagctgtatgagt 39
||||| ||| || |||||||||||||||||||||||||
Sbjct: 2 gggttggttgttatctttggttatctagctgtatgagt 39
>25888_gga-mir-9-2:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 7e-08
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| | | | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtgttttggtcttcataaagctagataaccgaaagta 75
Query: 75 taaact 80
|||||
Sbjct: 76 aaaact 81
>27645_mml-mir-9-1:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 2 gggttagtttttctctttggttatctagctgtatgagt 39
||||| ||| || |||||||||||||||||||||||||
Sbjct: 3 gggttggttgttatctttggttatctagctgtatgagt 40
>28355_hsa-mir-9-1:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 2 gggttagtttttctctttggttatctagctgtatgagt 39
||||| ||| || |||||||||||||||||||||||||
Sbjct: 3 gggttggttgttatctttggttatctagctgtatgagt 40
>30142_ptr-mir-9-1:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 2 gggttagtttttctctttggttatctagctgtatgagt 39
||||| ||| || |||||||||||||||||||||||||
Sbjct: 3 gggttggttgttatctttggttatctagctgtatgagt 40
>30746_ppy-mir-9-1:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 2 gggttagtttttctctttggttatctagctgtatgagt 39
||||| ||| || |||||||||||||||||||||||||
Sbjct: 3 gggttggttgttatctttggttatctagctgtatgagt 40
>31770_mmu-mir-9-1:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 2 gggttagtttttctctttggttatctagctgtatgagt 39
||||| ||| || |||||||||||||||||||||||||
Sbjct: 3 gggttggttgttatctttggttatctagctgtatgagt 40
>32652_rno-mir-9-1:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 2 gggttagtttttctctttggttatctagctgtatgagt 39
||||| ||| || |||||||||||||||||||||||||
Sbjct: 3 gggttggttgttatctttggttatctagctgtatgagt 40
>33102_rno-mir-3597-1:mirbase
Length = 108
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 2 gggttagtttttctctttggttatctagctgtatgagt 39
||||| ||| || |||||||||||||||||||||||||
Sbjct: 97 gggttggttgttatctttggttatctagctgtatgagt 60
>33103_rno-mir-3597-1:mirbase
Length = 108
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 2 gggttagtttttctctttggttatctagctgtatgagt 39
||||| ||| || |||||||||||||||||||||||||
Sbjct: 97 gggttggttgttatctttggttatctagctgtatgagt 60
>33907_ssc-mir-9-1:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 2 gggttagtttttctctttggttatctagctgtatgagt 39
||||| ||| || |||||||||||||||||||||||||
Sbjct: 3 gggttggttgttatctttggttatctagctgtatgagt 40
>34194_dre-mir-9-5:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 7e-08
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagtttatgtgatatcataaagctagagaaccgaatgta 74
||||||||||||||||||||||||| | | | ||||||||||||| ||||||| |||
Sbjct: 16 tctttggttatctagctgtatgagtattttgcacttcataaagctagataaccgaaagta 75
Query: 75 taaact 80
|||||
Sbjct: 76 aaaact 81
>35000_dpu-mir-9:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 10 ttttctctttggttatctagctgtatgagt 39
|||| |||||||||||||||||||||||||
Sbjct: 16 ttttttctttggttatctagctgtatgagt 45
>35007_dpu-mir-79:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 10 ttttctctttggttatctagctgtatgagt 39
|||| |||||||||||||||||||||||||
Sbjct: 18 ttttttctttggttatctagctgtatgagt 47
>38597_ppc-mir-9:mirbase
Length = 105
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 tctctttggttatctagctgtatga 37
|||||||||||||||||||||||||
Sbjct: 27 tctctttggttatctagctgtatga 51
>25422_pma-mir-9a-1:mirbase
Length = 88
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagt 39
>25423_pma-mir-9a-2:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagt 40
>25424_pma-mir-9b:mirbase
Length = 88
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 74 tctttggttatctagctgtatgagt 50
>25690_xtr-mir-9-3:mirbase
Length = 76
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 8 tctttggttatctagctgtatgagt 32
>26394_tgu-mir-9-1:mirbase
Length = 73
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 11 tctttggttatctagctgtatgagt 35
>26395_tgu-mir-9-2:mirbase
Length = 73
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 11 tctttggttatctagctgtatgagt 35
>26618_cfa-mir-9-1:mirbase
Length = 62
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 1 tctttggttatctagctgtatgagt 25
>26620_cfa-mir-9-3:mirbase
Length = 61
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 1 tctttggttatctagctgtatgagt 25
>26941_eca-mir-9a:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 11 tctttggttatctagctgtatgagt 35
>34190_dre-mir-9-1:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagt 39
>34191_dre-mir-9-2:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 42 tctttggttatctagctgtatgagt 66
>34537_fru-mir-9-1:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 15 tctttggttatctagctgtatgagt 39
>34538_fru-mir-9-2:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 8 tctttggttatctagctgtatgagt 32
>34539_fru-mir-9-3:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagt 40
>34685_tni-mir-9-1:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 19 tctttggttatctagctgtatgagt 43
>34686_tni-mir-9-2:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 8 tctttggttatctagctgtatgagt 32
>34687_tni-mir-9-3:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 16 tctttggttatctagctgtatgagt 40
>34967_isc-mir-79:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 24 tctttggttatctagctgtatgagt 48
>35048_api-mir-9a:mirbase
Length = 67
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 1 tctttggttatctagctgtatgagt 25
>35519_bmo-mir-9a:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 18 tctttggttatctagctgtatgagt 42
>36088_dan-mir-9a:mirbase
Length = 78
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagt 34
>36166_der-mir-9a:mirbase
Length = 78
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagt 34
>36254_dgr-mir-9a:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 9 tctttggttatctagctgtatgagt 33
>36347_dme-mir-9a:mirbase
Length = 78
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagt 34
>36348_dme-mir-9a:mirbase
Length = 78
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagt 34
>36764_dmo-mir-9a:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 9 tctttggttatctagctgtatgagt 33
>36837_dpe-mir-9a:mirbase
Length = 78
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagt 34
>36913_dps-mir-9a:mirbase
Length = 78
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagt 34
>37126_dse-mir-9a:mirbase
Length = 78
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagt 34
>37204_dsi-mir-9a:mirbase
Length = 78
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagt 34
>37340_dvi-mir-9a:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 9 tctttggttatctagctgtatgagt 33
>37415_dwi-mir-9a:mirbase
Length = 78
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagt 34
>37494_dya-mir-9a-1:mirbase
Length = 78
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagt 34
>37495_dya-mir-9a-2:mirbase
Length = 78
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagt 34
>37562_lmi-mir-9a:mirbase
Length = 61
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 1 tctttggttatctagctgtatgagt 25
>37697_tca-mir-9a:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagt 34
>37698_tca-mir-9a:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgagt 39
|||||||||||||||||||||||||
Sbjct: 10 tctttggttatctagctgtatgagt 34
>24646_bfl-mir-9-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgag 38
||||||||||||||||||||||||
Sbjct: 7 tctttggttatctagctgtatgag 30
>24647_bfl-mir-9-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgag 38
||||||||||||||||||||||||
Sbjct: 7 tctttggttatctagctgtatgag 30
>24648_bfl-mir-9-2:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgag 38
||||||||||||||||||||||||
Sbjct: 6 tctttggttatctagctgtatgag 29
>24649_bfl-mir-9-2:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgag 38
||||||||||||||||||||||||
Sbjct: 6 tctttggttatctagctgtatgag 29
>38099_bma-mir-9:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 ctttggttatctagctgtatgagt 39
||||||||||||||||||||||||
Sbjct: 15 ctttggttatctagctgtatgagt 38
>38107_bma-mir-79:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 ctttggttatctagctgtatgagt 39
||||||||||||||||||||||||
Sbjct: 15 ctttggttatctagctgtatgagt 38
>38938_emu-mir-9:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgag 38
||||||||||||||||||| ||||
Sbjct: 11 tctttggttatctagctgtgtgag 34
>38915_egr-mir-9:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatgag 38
||||||||||||||||||| ||||
Sbjct: 11 tctttggttatctagctgtgtgag 34
>39067_sme-mir-9a:mirbase
Length = 105
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 15 tctttggttatctagctgtatga 37
||||||||| |||||||||||||
Sbjct: 21 tctttggttttctagctgtatga 43
