miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34545_fru-mir-15a:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 15 ggtgatggtgtagcagcacagaatggtttgtgg 47
||||||| ||||||||||| |||||||||||||
Sbjct: 3 ggtgatgctgtagcagcacggaatggtttgtgg 35
>34202_dre-mir-15a-1:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 tgtagcagcacagaatggtttgtg 46
||||||||||||||||||||||||
Sbjct: 12 tgtagcagcacagaatggtttgtg 35
>34693_tni-mir-15a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 15 ggtgatggtgtagcagcacagaatggtttgtg 46
||||||| ||||||||||| ||||||||||||
Sbjct: 3 ggtgatgctgtagcagcacggaatggtttgtg 34
>25697_xtr-mir-15a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 gtagcagcacagaatggtttgtgg 47
||||||||||| ||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtgg 36
>25891_gga-mir-15a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 gtagcagcacagaatggtttgtgg 47
||||||||||| ||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtgg 36
>26396_tgu-mir-15a:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 gtagcagcacagaatggtttgtgg 47
||||||||||| ||||||||||||
Sbjct: 10 gtagcagcacataatggtttgtgg 33
>27478_age-mir-15a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 gtagcagcacagaatggtttgtgg 47
||||||||||| ||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtgg 36
>27539_lla-mir-15a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 gtagcagcacagaatggtttgtgg 47
||||||||||| ||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtgg 36
>27588_sla-mir-15a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 gtagcagcacagaatggtttgtgg 47
||||||||||| ||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtgg 36
>27650_mml-mir-15a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 gtagcagcacagaatggtttgtgg 47
||||||||||| ||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtgg 36
>28170_mne-mir-15a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 gtagcagcacagaatggtttgtgg 47
||||||||||| ||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtgg 36
>28258_ggo-mir-15a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 gtagcagcacagaatggtttgtgg 47
||||||||||| ||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtgg 36
>28360_hsa-mir-15a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 gtagcagcacagaatggtttgtgg 47
||||||||||| ||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtgg 36
>30042_ppa-mir-15a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 gtagcagcacagaatggtttgtgg 47
||||||||||| ||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtgg 36
>30146_ptr-mir-15a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 gtagcagcacagaatggtttgtgg 47
||||||||||| ||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtgg 36
>30751_ppy-mir-15a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 gtagcagcacagaatggtttgtgg 47
||||||||||| ||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtgg 36
>31393_lca-mir-15a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 gtagcagcacagaatggtttgtgg 47
||||||||||| ||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtgg 36
>31775_mmu-mir-15a:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 gtagcagcacagaatggtttgtgg 47
||||||||||| ||||||||||||
Sbjct: 14 gtagcagcacataatggtttgtgg 37
>33128_bta-mir-15a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 gtagcagcacagaatggtttgtgg 47
||||||||||| ||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtgg 36
>33911_ssc-mir-15a:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 gtagcagcacagaatggtttgtgg 47
||||||||||| ||||||||||||
Sbjct: 11 gtagcagcacataatggtttgtgg 34
