miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25893_gga-mir-15c:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 tgtagcagcacatcatggtttgta 60
||||||||||||||||||||||||
Sbjct: 9 tgtagcagcacatcatggtttgta 32
>26398_tgu-mir-15c:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 tgtagcagcacatcatggtttgta 60
||||||||||||||||||||||||
Sbjct: 12 tgtagcagcacatcatggtttgta 35
>31427_oan-mir-15c:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 tgtagcagcacatcatggtttgta 60
||||||||||||||||||||||||
Sbjct: 26 tgtagcagcacatcatggtttgta 49
>26397_tgu-mir-15b:mirbase
Length = 71
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 36 ctgtagcagcacatcatggtttg 58
|||||||||||||||||||||||
Sbjct: 8 ctgtagcagcacatcatggtttg 30
>25655_xla-mir-15c:mirbase
Length = 74
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 39 tagcagcacatcatggtttgta 60
||||||||||||||||||||||
Sbjct: 14 tagcagcacatcatggtttgta 35
>25699_xtr-mir-15c:mirbase
Length = 74
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 39 tagcagcacatcatggtttgta 60
||||||||||||||||||||||
Sbjct: 14 tagcagcacatcatggtttgta 35
>26946_eca-mir-15b:mirbase
Length = 64
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 36 ctgtagcagcacatcatggttt 57
||||||||||||||||||||||
Sbjct: 1 ctgtagcagcacatcatggttt 22
>27479_age-mir-15b:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 36 ctgtagcagcacatcatggttt 57
||||||||||||||||||||||
Sbjct: 17 ctgtagcagcacatcatggttt 38
>27540_lla-mir-15b:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 36 ctgtagcagcacatcatggttt 57
||||||||||||||||||||||
Sbjct: 17 ctgtagcagcacatcatggttt 38
>27651_mml-mir-15b:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 36 ctgtagcagcacatcatggttt 57
||||||||||||||||||||||
Sbjct: 17 ctgtagcagcacatcatggttt 38
>28171_mne-mir-15b:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 36 ctgtagcagcacatcatggttt 57
||||||||||||||||||||||
Sbjct: 17 ctgtagcagcacatcatggttt 38
>28259_ggo-mir-15b:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 36 ctgtagcagcacatcatggttt 57
||||||||||||||||||||||
Sbjct: 17 ctgtagcagcacatcatggttt 38
>28361_hsa-mir-15b:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 36 ctgtagcagcacatcatggttt 57
||||||||||||||||||||||
Sbjct: 17 ctgtagcagcacatcatggttt 38
>30043_ppa-mir-15b:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 36 ctgtagcagcacatcatggttt 57
||||||||||||||||||||||
Sbjct: 17 ctgtagcagcacatcatggttt 38
>30147_ptr-mir-15b:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 36 ctgtagcagcacatcatggttt 57
||||||||||||||||||||||
Sbjct: 17 ctgtagcagcacatcatggttt 38
>30752_ppy-mir-15b:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 36 ctgtagcagcacatcatggttt 57
||||||||||||||||||||||
Sbjct: 17 ctgtagcagcacatcatggttt 38
>31776_mmu-mir-15b:mirbase
Length = 64
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 36 ctgtagcagcacatcatggttt 57
||||||||||||||||||||||
Sbjct: 1 ctgtagcagcacatcatggttt 22
>32658_rno-mir-15b:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 36 ctgtagcagcacatcatggttt 57
||||||||||||||||||||||
Sbjct: 17 ctgtagcagcacatcatggttt 38
>33129_bta-mir-15b:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 36 ctgtagcagcacatcatggttt 57
||||||||||||||||||||||
Sbjct: 17 ctgtagcagcacatcatggttt 38
>33912_ssc-mir-15b:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 36 ctgtagcagcacatcatggttt 57
||||||||||||||||||||||
Sbjct: 17 ctgtagcagcacatcatggttt 38
>34202_dre-mir-15a-1:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 36 ctgtagcagcacatcatggtttgtaagttataa 68
||||||||||||| ||||||||| ||||||||
Sbjct: 11 ctgtagcagcacagaatggtttgtgagttataa 43
>25892_gga-mir-15b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tagcagcacatcatggtttg 58
||||||||||||||||||||
Sbjct: 19 tagcagcacatcatggtttg 38
>31426_oan-mir-15b:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 39 tagcagcacatcatggtttg 58
||||||||||||||||||||
Sbjct: 31 tagcagcacatcatggtttg 50
