miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25700_xtr-mir-16a:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 10 ctttagcagcacgtaaatattggtgt 35
||||||||||||||||||||||||||
Sbjct: 11 ctttagcagcacgtaaatattggtgt 36
>26399_tgu-mir-16a:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 10 ctttagcagcacgtaaatattggtgt 35
||||||||||||||||||||||||||
Sbjct: 8 ctttagcagcacgtaaatattggtgt 33
>31394_lca-mir-16:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 ttagcagcacgtaaatattggtgt 35
||||||||||||||||||||||||
Sbjct: 13 ttagcagcacgtaaatattggtgt 36
>31429_oan-mir-16b:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 8 cgctttagcagcacgtaaatattggtgt 35
|||| |||||||||||||||||||||||
Sbjct: 16 cgctctagcagcacgtaaatattggtgt 43
>33130_bta-mir-16a:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 ttagcagcacgtaaatattggtgt 35
||||||||||||||||||||||||
Sbjct: 13 ttagcagcacgtaaatattggtgt 36
>25894_gga-mir-16-1:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tagcagcacgtaaatattggtgt 35
|||||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattggtgt 36
>25895_gga-mir-16-2:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tagcagcacgtaaatattggtgt 35
|||||||||||||||||||||||
Sbjct: 17 tagcagcacgtaaatattggtgt 39
>25429_pma-mir-16:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 13 tagcagcacgtaaatattggtgtgt 37
|||||||||||||||||||| ||||
Sbjct: 10 tagcagcacgtaaatattggagtgt 34
>25701_xtr-mir-16b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttagcagcacgtaaatattgg 32
|||||||||||||||||||||
Sbjct: 13 ttagcagcacgtaaatattgg 33
>26400_tgu-mir-16b:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 13 tagcagcacgtaaatattggtgtgt 37
|||||||||||||||||||| ||||
Sbjct: 11 tagcagcacgtaaatattggagtgt 35
>26947_eca-mir-16:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 cgctttagcagcacgtaaatattgg 32
|||| ||||||||||||||||||||
Sbjct: 5 cgctctagcagcacgtaaatattgg 29
>27334_mdo-mir-16:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttagcagcacgtaaatattgg 32
|||||||||||||||||||||
Sbjct: 13 ttagcagcacgtaaatattgg 33
>27480_age-mir-16:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttagcagcacgtaaatattgg 32
|||||||||||||||||||||
Sbjct: 13 ttagcagcacgtaaatattgg 33
>27541_lla-mir-16:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttagcagcacgtaaatattgg 32
|||||||||||||||||||||
Sbjct: 13 ttagcagcacgtaaatattgg 33
>27589_sla-mir-16:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttagcagcacgtaaatattgg 32
|||||||||||||||||||||
Sbjct: 13 ttagcagcacgtaaatattgg 33
>27652_mml-mir-16-1:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttagcagcacgtaaatattgg 32
|||||||||||||||||||||
Sbjct: 13 ttagcagcacgtaaatattgg 33
>28172_mne-mir-16:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttagcagcacgtaaatattgg 32
|||||||||||||||||||||
Sbjct: 13 ttagcagcacgtaaatattgg 33
>28260_ggo-mir-16:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttagcagcacgtaaatattgg 32
|||||||||||||||||||||
Sbjct: 13 ttagcagcacgtaaatattgg 33
>28362_hsa-mir-16-1:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttagcagcacgtaaatattgg 32
|||||||||||||||||||||
Sbjct: 13 ttagcagcacgtaaatattgg 33
>30044_ppa-mir-16:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttagcagcacgtaaatattgg 32
|||||||||||||||||||||
Sbjct: 13 ttagcagcacgtaaatattgg 33
>30148_ptr-mir-16-1:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttagcagcacgtaaatattgg 32
|||||||||||||||||||||
Sbjct: 13 ttagcagcacgtaaatattgg 33
>30753_ppy-mir-16:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttagcagcacgtaaatattgg 32
|||||||||||||||||||||
Sbjct: 13 ttagcagcacgtaaatattgg 33
>31428_oan-mir-16a:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttagcagcacgtaaatattgg 32
|||||||||||||||||||||
Sbjct: 28 ttagcagcacgtaaatattgg 48
>31777_mmu-mir-16-1:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttagcagcacgtaaatattgg 32
|||||||||||||||||||||
Sbjct: 15 ttagcagcacgtaaatattgg 35
>32659_rno-mir-16:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 cgctttagcagcacgtaaatattgg 32
|||| ||||||||||||||||||||
Sbjct: 12 cgctctagcagcacgtaaatattgg 36
>33131_bta-mir-16b:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 cgctttagcagcacgtaaatattgg 32
|||| ||||||||||||||||||||
Sbjct: 12 cgctgtagcagcacgtaaatattgg 36
>33913_ssc-mir-16-1:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 cgctttagcagcacgtaaatattgg 32
|||| ||||||||||||||||||||
Sbjct: 3 cgctctagcagcacgtaaatattgg 27
>33914_ssc-mir-16-2:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttagcagcacgtaaatattgg 32
|||||||||||||||||||||
Sbjct: 8 ttagcagcacgtaaatattgg 28
>26625_cfa-mir-16-1:mirbase
Length = 65
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tagcagcacgtaaatattgg 32
||||||||||||||||||||
Sbjct: 1 tagcagcacgtaaatattgg 20
>26626_cfa-mir-16-2:mirbase
Length = 65
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tagcagcacgtaaatattgg 32
||||||||||||||||||||
Sbjct: 1 tagcagcacgtaaatattgg 20
>26948_eca-mir-16-2:mirbase
Length = 63
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tagcagcacgtaaatattgg 32
||||||||||||||||||||
Sbjct: 1 tagcagcacgtaaatattgg 20
>27653_mml-mir-16-2:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tagcagcacgtaaatattgg 32
||||||||||||||||||||
Sbjct: 10 tagcagcacgtaaatattgg 29
>28363_hsa-mir-16-2:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tagcagcacgtaaatattgg 32
||||||||||||||||||||
Sbjct: 10 tagcagcacgtaaatattgg 29
>30149_ptr-mir-16-2:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tagcagcacgtaaatattgg 32
||||||||||||||||||||
Sbjct: 9 tagcagcacgtaaatattgg 28
>30754_ppy-mir-16-2:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tagcagcacgtaaatattgg 32
||||||||||||||||||||
Sbjct: 10 tagcagcacgtaaatattgg 29
>31778_mmu-mir-16-2:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tagcagcacgtaaatattgg 32
||||||||||||||||||||
Sbjct: 17 tagcagcacgtaaatattgg 36
>34207_dre-mir-16b:mirbase
Length = 140
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tagcagcacgtaaatattgg 32
||||||||||||||||||||
Sbjct: 39 tagcagcacgtaaatattgg 58
>34208_dre-mir-16c:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 gctttagcagcacgtaaatattgg 32
|||||||||||| |||||||||||
Sbjct: 31 gctttagcagcatgtaaatattgg 54
>34547_fru-mir-16:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tagcagcacgtaaatattgg 32
||||||||||||||||||||
Sbjct: 13 tagcagcacgtaaatattgg 32
>34695_tni-mir-16:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tagcagcacgtaaatattgg 32
||||||||||||||||||||
Sbjct: 1 tagcagcacgtaaatattgg 20
