miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34547_fru-mir-16:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 30 tgctttagcagcatgtaaatattggagtta 59
|||| |||||||| ||||||||||||||||
Sbjct: 8 tgctgtagcagcacgtaaatattggagtta 37
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 74 cctccaatattgctcgtgctgctgaagcaa 103
|||||| ||||| |||||||||||||||||
Sbjct: 53 cctccagtattgatcgtgctgctgaagcaa 82
>34695_tni-mir-16:mirbase
Length = 72
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 74 cctccaatattgctcgtgctgctgaagcaa 103
|||||| ||||| |||||||||||||||||
Sbjct: 41 cctccagtattgatcgtgctgctgaagcaa 70
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 35 tagcagcatgtaaatattggagtta 59
|||||||| ||||||||||||||||
Sbjct: 1 tagcagcacgtaaatattggagtta 25
>25700_xtr-mir-16a:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 32 ctttagcagcatgtaaatattggagtta 59
||||||||||| ||||||||||| ||||
Sbjct: 11 ctttagcagcacgtaaatattggtgtta 38
>26399_tgu-mir-16a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 32 ctttagcagcatgtaaatattggagtta 59
||||||||||| ||||||||||| ||||
Sbjct: 8 ctttagcagcacgtaaatattggtgtta 35
>34206_dre-mir-16a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 31 gctttagcagcatgtaaatattgg 54
|||||||||||| |||||||||||
Sbjct: 9 gctttagcagcacgtaaatattgg 32
