miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34551_fru-mir-19a:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 5 gcagttctctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatcta 64
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 1 gcagttctctgctagttttgcatagttgcactacaagaatagaggagttgtgcaaatcta 60
Query: 65 tgcaaaactgatggtggcctg 85
|||||||||||||||||||||
Sbjct: 61 tgcaaaactgatggtggcctg 81
>34699_tni-mir-19a:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 5 gcagttctctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatcta 64
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 1 gcagttctctgctagttttgcatagttgcactacaagaatagaggagttgtgcaaatcta 60
Query: 65 tgcaaaactgatggtggcctg 85
|||||||||||||||||||||
Sbjct: 61 tgcaaaactgatggtggcctg 81
>27593_sla-mir-19a:mirbase
Length = 82
Score = 115 bits (58), Expect = 5e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 5 gcagttctctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatcta 64
||||| ||||| ||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 1 gcagtcctctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatcta 60
Query: 65 tgcaaaactgatggtggcctgc 86
||||||||||||||||||||||
Sbjct: 61 tgcaaaactgatggtggcctgc 82
>27658_mml-mir-19a:mirbase
Length = 82
Score = 115 bits (58), Expect = 5e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 5 gcagttctctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatcta 64
||||| ||||| ||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 1 gcagtcctctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatcta 60
Query: 65 tgcaaaactgatggtggcctgc 86
||||||||||||||||||||||
Sbjct: 61 tgcaaaactgatggtggcctgc 82
>28264_ggo-mir-19a:mirbase
Length = 82
Score = 115 bits (58), Expect = 5e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 5 gcagttctctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatcta 64
||||| ||||| ||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 1 gcagtcctctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatcta 60
Query: 65 tgcaaaactgatggtggcctgc 86
||||||||||||||||||||||
Sbjct: 61 tgcaaaactgatggtggcctgc 82
>28367_hsa-mir-19a:mirbase
Length = 82
Score = 115 bits (58), Expect = 5e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 5 gcagttctctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatcta 64
||||| ||||| ||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 1 gcagtcctctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatcta 60
Query: 65 tgcaaaactgatggtggcctgc 86
||||||||||||||||||||||
Sbjct: 61 tgcaaaactgatggtggcctgc 82
>30048_ppa-mir-19a:mirbase
Length = 82
Score = 115 bits (58), Expect = 5e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 5 gcagttctctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatcta 64
||||| ||||| ||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 1 gcagtcctctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatcta 60
Query: 65 tgcaaaactgatggtggcctgc 86
||||||||||||||||||||||
Sbjct: 61 tgcaaaactgatggtggcctgc 82
>30154_ptr-mir-19a:mirbase
Length = 82
Score = 115 bits (58), Expect = 5e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 5 gcagttctctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatcta 64
||||| ||||| ||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 1 gcagtcctctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatcta 60
Query: 65 tgcaaaactgatggtggcctgc 86
||||||||||||||||||||||
Sbjct: 61 tgcaaaactgatggtggcctgc 82
>30759_ppy-mir-19a:mirbase
Length = 82
Score = 115 bits (58), Expect = 5e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 5 gcagttctctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatcta 64
||||| ||||| ||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 1 gcagtcctctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatcta 60
Query: 65 tgcaaaactgatggtggcctgc 86
||||||||||||||||||||||
Sbjct: 61 tgcaaaactgatggtggcctgc 82
>31398_lca-mir-19a:mirbase
Length = 82
Score = 115 bits (58), Expect = 5e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 5 gcagttctctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatcta 64
||||| ||||| ||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 1 gcagtcctctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatcta 60
Query: 65 tgcaaaactgatggtggcctgc 86
||||||||||||||||||||||
Sbjct: 61 tgcaaaactgatggtggcctgc 82
>33136_bta-mir-19a:mirbase
Length = 82
Score = 115 bits (58), Expect = 5e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 5 gcagttctctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatcta 64
||||| ||||| ||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 1 gcagtcctctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatcta 60
Query: 65 tgcaaaactgatggtggcctgc 86
||||||||||||||||||||||
Sbjct: 61 tgcaaaactgatggtggcctgc 82
>33919_ssc-mir-19a:mirbase
Length = 82
Score = 115 bits (58), Expect = 5e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 5 gcagttctctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatcta 64
||||| ||||| ||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 1 gcagtcctctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatcta 60
Query: 65 tgcaaaactgatggtggcctgc 86
||||||||||||||||||||||
Sbjct: 61 tgcaaaactgatggtggcctgc 82
>27338_mdo-mir-19a:mirbase
Length = 81
Score = 113 bits (57), Expect = 2e-26
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 5 gcagttctctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatcta 64
||||| ||||| ||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 1 gcagtcctctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatcta 60
Query: 65 tgcaaaactgatggtggcctg 85
|||||||||||||||||||||
Sbjct: 61 tgcaaaactgatggtggcctg 81
>31433_oan-mir-19a:mirbase
Length = 140
Score = 111 bits (56), Expect = 8e-26
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 4 tgcagttctctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatct 63
||||| |||||| ||||||||||||||||||||||||||| | | ||||||||||||||
Sbjct: 43 tgcagctctctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatct 102
Query: 64 atgcaaaactgatggtggcctgct 87
|||||||||||| |||||||||||
Sbjct: 103 atgcaaaactgacggtggcctgct 126
>31782_mmu-mir-19a:mirbase
Length = 82
Score = 111 bits (56), Expect = 8e-26
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 11 ctctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatctatgcaaa 70
||||| ||||||||||||||||||||||||||| | | |||||||||||||||||||||
Sbjct: 7 ctctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaa 66
Query: 71 actgatggtggcctgc 86
||||||||||||||||
Sbjct: 67 actgatggtggcctgc 82
>26952_eca-mir-19a:mirbase
Length = 82
Score = 109 bits (55), Expect = 3e-25
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 12 tctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatctatgcaaaa 71
|||| ||||||||||||||||||||||||||| | | ||||||||||||||||||||||
Sbjct: 8 tctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaa 67
Query: 72 ctgatggtggcctgc 86
|||||||||||||||
Sbjct: 68 ctgatggtggcctgc 82
>27484_age-mir-19a:mirbase
Length = 82
Score = 107 bits (54), Expect = 1e-24
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 5 gcagttctctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatcta 64
||||| ||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1 gcagtcctctgttagttttgcatagttgcactacaagaagcatgtagttgtgcaaatcta 60
Query: 65 tgcaaaactgatggtggcctgc 86
||||||||||||||||||||||
Sbjct: 61 tgcaaaactgatggtggcctgc 82
>27545_lla-mir-19a:mirbase
Length = 82
Score = 107 bits (54), Expect = 1e-24
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 5 gcagttctctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatcta 64
||||| ||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1 gcagtcctctgttagttttgcatagttgcactacaagaagcatgtagttgtgcaaatcta 60
Query: 65 tgcaaaactgatggtggcctgc 86
||||||||||||||||||||||
Sbjct: 61 tgcaaaactgatggtggcctgc 82
>28176_mne-mir-19a:mirbase
Length = 82
Score = 107 bits (54), Expect = 1e-24
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 5 gcagttctctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatcta 64
||||| ||||| ||||||||||||||||||||||| ||| | | |||||||||||||||
Sbjct: 1 gcagtcctctgttagttttgcatagttgcactacaggaagaatgtagttgtgcaaatcta 60
Query: 65 tgcaaaactgatggtggcctgc 86
||||||||||||||||||||||
Sbjct: 61 tgcaaaactgatggtggcctgc 82
>32665_rno-mir-19a:mirbase
Length = 82
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 19 gttttgcatagttgcactacaagaaaacgggagttgtgcaaatctatgcaaaactgatgg 78
||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||
Sbjct: 15 gttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaactgatgg 74
Query: 79 tggcctgc 86
||||||||
Sbjct: 75 tggcctgc 82
>25707_xtr-mir-19a:mirbase
Length = 81
Score = 101 bits (51), Expect = 8e-23
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 12 tctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatctatgcaaaa 71
|||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 8 tctgttagttttgcatagttgcactacaagaaaaatgtagttgtgcaaatctatgcaaaa 67
Query: 72 ctgatgg 78
|||||||
Sbjct: 68 ctgatgg 74
>25901_gga-mir-19a:mirbase
Length = 81
Score = 99.6 bits (50), Expect = 3e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 12 tctgctagttttgcatagttgcactacaagaaaacgggagttgtgcaaatctatgcaaaa 71
|||| ||||||||||||||||||||||| ||| | | ||||||||||||||||||||||
Sbjct: 8 tctgttagttttgcatagttgcactacaggaagaatgtagttgtgcaaatctatgcaaaa 67
Query: 72 ctgatggtggcctg 85
||||||||||||||
Sbjct: 68 ctgatggtggcctg 81
>26406_tgu-mir-19a:mirbase
Length = 70
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 17 tagttttgcatagttgcactacaagaaaacgggagttgtgcaaatctatgcaaaactgat 76
||||||||||||||||||||||||||| | | |||||||||||||||||||| |||||
Sbjct: 5 tagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagctgat 64
Query: 77 ggtggc 82
||||||
Sbjct: 65 ggtggc 70
>26630_cfa-mir-19a:mirbase
Length = 58
Score = 83.8 bits (42), Expect = 2e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 18 agttttgcatagttgcactacaagaaaacgggagttgtgcaaatctatgcaaaactga 75
|||||||||||||||||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 1 agttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaactga 58
>34215_dre-mir-19b:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgatggtggc 82
|||||||||| ||||||||||||| |||||
Sbjct: 55 tgtgcaaatccatgcaaaactgattgtggc 84
>31784_mmu-mir-19b-2:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgatggtgg 81
|||||||||| ||||||||||||| ||||
Sbjct: 54 tgtgcaaatccatgcaaaactgattgtgg 82
>25436_pma-mir-19b:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgatggtg 80
|||||||||| |||||||||||| ||||
Sbjct: 53 tgtgcaaatccatgcaaaactgacggtg 80
>25709_xtr-mir-19b-2:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgat 76
|||||||||| |||||||||||||
Sbjct: 49 tgtgcaaatccatgcaaaactgat 72
>26954_eca-mir-19b-2:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgat 76
|||||||||| |||||||||||||
Sbjct: 62 tgtgcaaatccatgcaaaactgat 85
>27486_age-mir-19b-2:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgat 76
|||||||||| |||||||||||||
Sbjct: 62 tgtgcaaatccatgcaaaactgat 85
>27547_lla-mir-19b-2:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgat 76
|||||||||| |||||||||||||
Sbjct: 62 tgtgcaaatccatgcaaaactgat 85
>27595_sla-mir-19b-2:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgat 76
|||||||||| |||||||||||||
Sbjct: 62 tgtgcaaatccatgcaaaactgat 85
>27660_mml-mir-19b-2:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgat 76
|||||||||| |||||||||||||
Sbjct: 62 tgtgcaaatccatgcaaaactgat 85
>28178_mne-mir-19b-2:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgat 76
|||||||||| |||||||||||||
Sbjct: 62 tgtgcaaatccatgcaaaactgat 85
>28266_ggo-mir-19b-2:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgat 76
|||||||||| |||||||||||||
Sbjct: 62 tgtgcaaatccatgcaaaactgat 85
>28369_hsa-mir-19b-2:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgat 76
|||||||||| |||||||||||||
Sbjct: 62 tgtgcaaatccatgcaaaactgat 85
>30050_ppa-mir-19b-2:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgat 76
|||||||||| |||||||||||||
Sbjct: 62 tgtgcaaatccatgcaaaactgat 85
>30156_ptr-mir-19b-2:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgat 76
|||||||||| |||||||||||||
Sbjct: 63 tgtgcaaatccatgcaaaactgat 86
>30761_ppy-mir-19b-2:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgat 76
|||||||||| |||||||||||||
Sbjct: 62 tgtgcaaatccatgcaaaactgat 85
>31400_lca-mir-19b-2:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgat 76
|||||||||| |||||||||||||
Sbjct: 56 tgtgcaaatccatgcaaaactgat 79
>31434_oan-mir-19b:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgat 76
|||||||||| |||||||||||||
Sbjct: 59 tgtgcaaatccatgcaaaactgat 82
>32667_rno-mir-19b-2:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgat 76
|||||||||| |||||||||||||
Sbjct: 62 tgtgcaaatccatgcaaaactgat 85
>33138_bta-mir-19b-2:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgat 76
|||||||||| |||||||||||||
Sbjct: 56 tgtgcaaatccatgcaaaactgat 79
>33921_ssc-mir-19b-2:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 tgtgcaaatctatgcaaaactgat 76
|||||||||| |||||||||||||
Sbjct: 51 tgtgcaaatccatgcaaaactgat 74
