miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25658_xla-mir-20:mirbase
Length = 74
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 13 gcagttccaaagtgctcacagtgcaggtagt 43
|||||||||||||||||| ||||||||||||
Sbjct: 1 gcagttccaaagtgctcatagtgcaggtagt 31
>25711_xtr-mir-20b:mirbase
Length = 74
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 13 gcagttccaaagtgctcacagtgcaggtagt 43
|||||||||||||||||| ||||||||||||
Sbjct: 1 gcagttccaaagtgctcatagtgcaggtagt 31
>26634_cfa-mir-20b:mirbase
Length = 68
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 19 ccaaagtgctcacagtgcaggtagt 43
|||||||||||||||||||||||||
Sbjct: 4 ccaaagtgctcacagtgcaggtagt 28
>33140_bta-mir-20b:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 19 ccaaagtgctcacagtgcaggtagt 43
|||||||||||||||||||||||||
Sbjct: 5 ccaaagtgctcacagtgcaggtagt 29
>31437_oan-mir-20b:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 8 tcctggcagttccaaagtgctcacagtgcaggtagt 43
||||| |||| |||||||||||| ||||||||||||
Sbjct: 12 tcctgacagtaccaaagtgctcatagtgcaggtagt 47
>25703_xtr-mir-17:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 15 caaagtgcttacagtgcaggtagtg 39
>25704_xtr-mir-17:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 15 caaagtgcttacagtgcaggtagtg 39
>25897_gga-mir-17:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>25898_gga-mir-17:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>26402_tgu-mir-17a:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 3 caaagtgcttacagtgcaggtagtg 27
>26403_tgu-mir-17a:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 3 caaagtgcttacagtgcaggtagtg 27
>26627_cfa-mir-17:mirbase
Length = 59
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 1 caaagtgcttacagtgcaggtagtg 25
>26949_eca-mir-17:mirbase
Length = 59
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 1 caaagtgcttacagtgcaggtagtg 25
>26956_eca-mir-20b:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 ccaaagtgctcacagtgcaggtagt 43
|||||||||||| ||||||||||||
Sbjct: 5 ccaaagtgctcatagtgcaggtagt 29
>27335_mdo-mir-17:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>27336_mdo-mir-17:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>27481_age-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>27482_age-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>27542_lla-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>27543_lla-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>27590_sla-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>27591_sla-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>27654_mml-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>27655_mml-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>27662_mml-mir-20b:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 ccaaagtgctcacagtgcaggtagt 43
|||||||||||| ||||||||||||
Sbjct: 5 ccaaagtgctcatagtgcaggtagt 29
>28173_mne-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>28174_mne-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>28261_ggo-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>28262_ggo-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>28364_hsa-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>28371_hsa-mir-20b:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 ccaaagtgctcacagtgcaggtagt 43
|||||||||||| ||||||||||||
Sbjct: 5 ccaaagtgctcatagtgcaggtagt 29
>30045_ppa-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>30046_ppa-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>30150_ptr-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>30151_ptr-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>30158_ptr-mir-20b:mirbase
Length = 68
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 ccaaagtgctcacagtgcaggtagt 43
|||||||||||| ||||||||||||
Sbjct: 5 ccaaagtgctcatagtgcaggtagt 29
>30755_ppy-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>30756_ppy-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>30763_ppy-mir-20b:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 ccaaagtgctcacagtgcaggtagt 43
|||||||||||| ||||||||||||
Sbjct: 5 ccaaagtgctcatagtgcaggtagt 29
>31395_lca-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>31396_lca-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>31431_oan-mir-17:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>31779_mmu-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>31786_mmu-mir-20b:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 ccaaagtgctcacagtgcaggtagt 43
|||||||||||| ||||||||||||
Sbjct: 11 ccaaagtgctcatagtgcaggtagt 35
>32660_rno-mir-17-1:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>32661_rno-mir-17-1:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>33132_bta-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>33133_bta-mir-17:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagtg 38
>33915_ssc-mir-17:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 10 caaagtgcttacagtgcaggtagtg 34
>33916_ssc-mir-17:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagtg 44
||||||||| |||||||||||||||
Sbjct: 10 caaagtgcttacagtgcaggtagtg 34
>34548_fru-mir-17-1:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 ccaaagtgctcacagtgcaggtagt 43
|||||||||| ||||||||||||||
Sbjct: 13 ccaaagtgcttacagtgcaggtagt 37
>34696_tni-mir-17-1:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 ccaaagtgctcacagtgcaggtagt 43
|||||||||| ||||||||||||||
Sbjct: 13 ccaaagtgcttacagtgcaggtagt 37
>32669_rno-mir-20b:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 ccaaagtgctcacagtgcaggtag 42
|||||||||||| |||||||||||
Sbjct: 7 ccaaagtgctcatagtgcaggtag 30
>32670_rno-mir-20b:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 ccaaagtgctcacagtgcaggtag 42
|||||||||||| |||||||||||
Sbjct: 7 ccaaagtgctcatagtgcaggtag 30
>34209_dre-mir-17a-1:mirbase
Length = 138
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagt 43
||||||||| ||||||||||||||
Sbjct: 41 caaagtgcttacagtgcaggtagt 64
>34210_dre-mir-17a-2:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagt 43
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>34549_fru-mir-17-2:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagt 43
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
>34697_tni-mir-17-2:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 caaagtgctcacagtgcaggtagt 43
||||||||| ||||||||||||||
Sbjct: 14 caaagtgcttacagtgcaggtagt 37
