miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34220_dre-mir-21-1:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 34 tagcttatcagactggtgttggct 57
||||||||||||||||||||||||
Sbjct: 49 tagcttatcagactggtgttggct 72
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 taggctgtctgacattttgggc 105
||||||||||||||||||||||
Sbjct: 101 taggctgtctgacattttgggc 122
>34554_fru-mir-21:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 34 tagcttatcagactggtgttggct 57
||||||||||||||||||||||||
Sbjct: 8 tagcttatcagactggtgttggct 31
>34702_tni-mir-21:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 34 tagcttatcagactggtgttggct 57
||||||||||||||||||||||||
Sbjct: 39 tagcttatcagactggtgttggct 62
>31438_oan-mir-21:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 67 tggcaacagcagtctaataggctgtctgacattttgg 103
|||||||||||||| | | ||||||||||||||||||
Sbjct: 64 tggcaacagcagtcga-tgggctgtctgacattttgg 99
>31751_cgr-mir-21:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 67 tggcaacagcagtctaataggctgtctgacattttgg 103
|||||||||||||| | | ||||||||||||||||||
Sbjct: 53 tggcaacagcagtcga-tgggctgtctgacattttgg 88
>31787_mmu-mir-21:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 67 tggcaacagcagtctaataggctgtctgacattttgg 103
|||||||||||||| | | ||||||||||||||||||
Sbjct: 53 tggcaacagcagtcga-tgggctgtctgacattttgg 88
>32671_rno-mir-21:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 67 tggcaacagcagtctaataggctgtctgacattttgg 103
|||||||||||||| | | ||||||||||||||||||
Sbjct: 53 tggcaacagcagtcga-tgggctgtctgacattttgg 88
>33923_ssc-mir-21:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 67 tggcaacagcagtctaataggctgtctgacattttgg 103
|||||||||||||| | | ||||||||||||||||||
Sbjct: 53 tggcaacagcagtcga-tgggctgtctgacattttgg 88
>25905_gga-mir-21:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 84 taggctgtctgacattttgg 103
||||||||||||||||||||
Sbjct: 69 taggctgtctgacattttgg 88
