miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34555_fru-mir-22a:mirbase
Length = 86
Score = 133 bits (67), Expect = 2e-32
Identities = 79/83 (95%)
Strand = Plus / Plus
Query: 4 gacctgcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgcca 63
||||| |||||||||||||||||||||||||||||||| ||| | |||||||||||||||
Sbjct: 4 gacctacagcagttcttcactggcaagctttatgtcctcgtgcaacagctaaagctgcca 63
Query: 64 gctgaagaactgttgtggttggc 86
|||||||||||||||||||||||
Sbjct: 64 gctgaagaactgttgtggttggc 86
>34703_tni-mir-22a:mirbase
Length = 86
Score = 117 bits (59), Expect = 1e-27
Identities = 74/79 (93%)
Strand = Plus / Plus
Query: 4 gacctgcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgcca 63
||||| |||||||||||||||||||||||||||||||| ||| | | |||||||||||||
Sbjct: 4 gacctacagcagttcttcactggcaagctttatgtcctcgtgcaaccgctaaagctgcca 63
Query: 64 gctgaagaactgttgtggt 82
|||||||||||||||||||
Sbjct: 64 gctgaagaactgttgtggt 82
>25906_gga-mir-22:mirbase
Length = 100
Score = 91.7 bits (46), Expect = 8e-20
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||||||||||||| ||||||||||||||||||| | || ||||||||||||||| |||
Sbjct: 16 gcagcagttcttcagtggcaagctttatgtccttctctagtagctaaagctgccagttga 75
Query: 69 agaactgttg 78
||||||||||
Sbjct: 76 agaactgttg 85
>31439_oan-mir-22:mirbase
Length = 122
Score = 77.8 bits (39), Expect = 1e-15
Identities = 62/69 (89%), Gaps = 3/69 (4%)
Strand = Plus / Plus
Query: 10 cagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctgaa 69
||||||||||||| |||||||||||| ||||| || ||||||||||||||||| ||||
Sbjct: 32 cagcagttcttcagtggcaagctttacgtcct---gtcccagctaaagctgccagttgaa 88
Query: 70 gaactgttg 78
|||||||||
Sbjct: 89 gaactgttg 97
>26958_eca-mir-22:mirbase
Length = 85
Score = 71.9 bits (36), Expect = 7e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 10 gcagtagttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttga 66
Query: 69 agaactgttg 78
||||||||||
Sbjct: 67 agaactgttg 76
>27489_age-mir-22:mirbase
Length = 85
Score = 71.9 bits (36), Expect = 7e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 10 gcagtagttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttga 66
Query: 69 agaactgttg 78
||||||||||
Sbjct: 67 agaactgttg 76
>27549_lla-mir-22:mirbase
Length = 85
Score = 71.9 bits (36), Expect = 7e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 10 gcagtagttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttga 66
Query: 69 agaactgttg 78
||||||||||
Sbjct: 67 agaactgttg 76
>27664_mml-mir-22:mirbase
Length = 85
Score = 71.9 bits (36), Expect = 7e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 10 gcagtagttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttga 66
Query: 69 agaactgttg 78
||||||||||
Sbjct: 67 agaactgttg 76
>28181_mne-mir-22:mirbase
Length = 85
Score = 71.9 bits (36), Expect = 7e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 10 gcagtagttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttga 66
Query: 69 agaactgttg 78
||||||||||
Sbjct: 67 agaactgttg 76
>28373_hsa-mir-22:mirbase
Length = 85
Score = 71.9 bits (36), Expect = 7e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 10 gcagtagttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttga 66
Query: 69 agaactgttg 78
||||||||||
Sbjct: 67 agaactgttg 76
>30053_ppa-mir-22:mirbase
Length = 85
Score = 71.9 bits (36), Expect = 7e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 10 gcagtagttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttga 66
Query: 69 agaactgttg 78
||||||||||
Sbjct: 67 agaactgttg 76
>30160_ptr-mir-22:mirbase
Length = 85
Score = 71.9 bits (36), Expect = 7e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 10 gcagtagttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttga 66
Query: 69 agaactgttg 78
||||||||||
Sbjct: 67 agaactgttg 76
>30765_ppy-mir-22:mirbase
Length = 85
Score = 71.9 bits (36), Expect = 7e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 10 gcagtagttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttga 66
Query: 69 agaactgttg 78
||||||||||
Sbjct: 67 agaactgttg 76
>31402_lca-mir-22:mirbase
Length = 85
Score = 71.9 bits (36), Expect = 7e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 10 gcagtagttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttga 66
Query: 69 agaactgttg 78
||||||||||
Sbjct: 67 agaactgttg 76
>31788_mmu-mir-22:mirbase
Length = 95
Score = 71.9 bits (36), Expect = 7e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 14 gcagtagttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttga 70
Query: 69 agaactgttg 78
||||||||||
Sbjct: 71 agaactgttg 80
>32672_rno-mir-22:mirbase
Length = 95
Score = 71.9 bits (36), Expect = 7e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 14 gcagtagttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttga 70
Query: 69 agaactgttg 78
||||||||||
Sbjct: 71 agaactgttg 80
>33142_bta-mir-22:mirbase
Length = 85
Score = 71.9 bits (36), Expect = 7e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 10 gcagtagttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttga 66
Query: 69 agaactgttg 78
||||||||||
Sbjct: 67 agaactgttg 76
>33143_bta-mir-22:mirbase
Length = 85
Score = 71.9 bits (36), Expect = 7e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 10 gcagtagttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttga 66
Query: 69 agaactgttg 78
||||||||||
Sbjct: 67 agaactgttg 76
>33790_bta-mir-3600:mirbase
Length = 81
Score = 71.9 bits (36), Expect = 7e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Minus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 74 gcagtagttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttga 18
Query: 69 agaactgttg 78
||||||||||
Sbjct: 17 agaactgttg 8
>33924_ssc-mir-22:mirbase
Length = 80
Score = 71.9 bits (36), Expect = 7e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 6 gcagtagttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttga 62
Query: 69 agaactgttg 78
||||||||||
Sbjct: 63 agaactgttg 72
>33925_ssc-mir-22:mirbase
Length = 80
Score = 71.9 bits (36), Expect = 7e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 6 gcagtagttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttga 62
Query: 69 agaactgttg 78
||||||||||
Sbjct: 63 agaactgttg 72
>26636_cfa-mir-22:mirbase
Length = 60
Score = 65.9 bits (33), Expect = 4e-12
Identities = 56/63 (88%), Gaps = 3/63 (4%)
Strand = Plus / Plus
Query: 14 agttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctgaagaac 73
||||||||| |||||||||||||||||| | ||||||||||||||||| ||||||||
Sbjct: 1 agttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttgaagaac 57
Query: 74 tgt 76
|||
Sbjct: 58 tgt 60
>27342_mdo-mir-22:mirbase
Length = 81
Score = 63.9 bits (32), Expect = 2e-11
Identities = 58/66 (87%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 10 cagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctgaa 69
||||||||||||| |||| ||||||||||| | || ||||||||||||||||| ||||
Sbjct: 9 cagcagttcttcagtggcgagctttatgtctt---gtcccagctaaagctgccagttgaa 65
Query: 70 gaactg 75
||||||
Sbjct: 66 gaactg 71
>27597_sla-mir-22:mirbase
Length = 85
Score = 63.9 bits (32), Expect = 2e-11
Identities = 61/70 (87%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
|||| ||||||||| ||||||||||||||||| || || |||||||||||||| |||
Sbjct: 10 gcagtagttcttcagtggcaagctttatgtcc---tgaccccgctaaagctgccagttga 66
Query: 69 agaactgttg 78
||||||||||
Sbjct: 67 agaactgttg 76
>34556_fru-mir-22b:mirbase
Length = 86
Score = 54.0 bits (27), Expect = 2e-08
Identities = 59/67 (88%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 15 gttcttcactggcaagctttatgtccttgtgtacca-gctaaagctgccagctgaagaac 73
||||||||||||| |||||||||||| | || ||| |||||||||||||| |||||| |
Sbjct: 15 gttcttcactggctagctttatgtcc-tctgacccatgctaaagctgccagttgaagagc 73
Query: 74 tgttgtg 80
|||||||
Sbjct: 74 tgttgtg 80
>25712_xtr-mir-22:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 11 agcagttcttcactggcaagctttatgt 38
|||||||||||| |||||||||||||||
Sbjct: 14 agcagttcttcagtggcaagctttatgt 41
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 51 gctaaagctgccagctgaagaactgttg 78
|||||||||||||| |||||||||||||
Sbjct: 53 gctaaagctgccagttgaagaactgttg 80
>34704_tni-mir-22b:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 gttcttcactggcaagctttatgtcct 41
||||||||||||| |||||||||||||
Sbjct: 15 gttcttcactggctagctttatgtcct 41
>34223_dre-mir-22b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 53 taaagctgccagctgaagaactgttgtgg 81
|||||||||||| |||||| |||||||||
Sbjct: 49 taaagctgccagttgaagagctgttgtgg 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 gttcttcactggcaagctttatgt 38
||||||||||||| ||||||||||
Sbjct: 15 gttcttcactggctagctttatgt 38
