miRNEST 2.0, an integrative microRNA resource :: BLAST
>26413_tgu-mir-24:mirbase
Length = 132
Score = 63.9 bits (32), Expect = 3e-11
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 38 cctcccgtgcctactgagctgattacagtactg--tgcaaacactggctcagttcagcag 95
||||| ||||||||||||||||| |||| ||| | | ||||||||||||||||||||
Sbjct: 57 cctccggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcag 116
Query: 96 gaacaggagtc 106
|||||||||||
Sbjct: 117 gaacaggagtc 127
>32511_mmu-mir-3074-1:mirbase
Length = 85
Score = 63.9 bits (32), Expect = 3e-11
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 38 cctcccgtgcctactgagctgattacagtactg--tgcaaacactggctcagttcagcag 95
||||| ||||||||||||||||| |||| || | || ||||||||||||||||||||
Sbjct: 77 cctccggtgcctactgagctgatatcagttctcatttcacacactggctcagttcagcag 18
Query: 96 gaacaggagtc 106
|||||||||||
Sbjct: 17 gaacaggagtc 7
>32512_mmu-mir-3074-1:mirbase
Length = 85
Score = 63.9 bits (32), Expect = 3e-11
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 38 cctcccgtgcctactgagctgattacagtactg--tgcaaacactggctcagttcagcag 95
||||| ||||||||||||||||| |||| || | || ||||||||||||||||||||
Sbjct: 77 cctccggtgcctactgagctgatatcagttctcatttcacacactggctcagttcagcag 18
Query: 96 gaacaggagtc 106
|||||||||||
Sbjct: 17 gaacaggagtc 7
>33024_rno-mir-3074:mirbase
Length = 117
Score = 63.9 bits (32), Expect = 3e-11
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 38 cctcccgtgcctactgagctgattacagtactg--tgcaaacactggctcagttcagcag 95
||||| ||||||||||||||||| |||| || | || ||||||||||||||||||||
Sbjct: 90 cctccggtgcctactgagctgatatcagttctcatttcacacactggctcagttcagcag 31
Query: 96 gaacaggagtc 106
|||||||||||
Sbjct: 30 gaacaggagtc 20
>29230_hsa-mir-3074:mirbase
Length = 81
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 76 acactggctcagttcagcaggaacaggagtc 106
|||||||||||||||||||||||||||||||
Sbjct: 35 acactggctcagttcagcaggaacaggagtc 5
>29231_hsa-mir-3074:mirbase
Length = 81
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 76 acactggctcagttcagcaggaacaggagtc 106
|||||||||||||||||||||||||||||||
Sbjct: 35 acactggctcagttcagcaggaacaggagtc 5
>33929_ssc-mir-24-2:mirbase
Length = 80
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacaggagtc 106
|||||||||||||||||||||||||||||||
Sbjct: 48 acactggctcagttcagcaggaacaggagtc 78
>27346_mdo-mir-24-2:mirbase
Length = 73
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 78 actggctcagttcagcaggaacaggagtct 107
||||||||||||||||||||||||||||||
Sbjct: 44 actggctcagttcagcaggaacaggagtct 73
>31792_mmu-mir-24-2:mirbase
Length = 107
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 77 cactggctcagttcagcaggaacaggagtc 106
||||||||||||||||||||||||||||||
Sbjct: 58 cactggctcagttcagcaggaacaggagtc 87
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 37 gcctcccgtgcctactgagctga 59
|||||||||||||||||||||||
Sbjct: 18 gcctcccgtgcctactgagctga 40
>32513_mmu-mir-3074-2:mirbase
Length = 83
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 77 cactggctcagttcagcaggaacaggagtc 106
||||||||||||||||||||||||||||||
Sbjct: 36 cactggctcagttcagcaggaacaggagtc 7
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 37 gcctcccgtgcctactgagctga 59
|||||||||||||||||||||||
Sbjct: 76 gcctcccgtgcctactgagctga 54
>32514_mmu-mir-3074-2:mirbase
Length = 83
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 77 cactggctcagttcagcaggaacaggagtc 106
||||||||||||||||||||||||||||||
Sbjct: 36 cactggctcagttcagcaggaacaggagtc 7
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 37 gcctcccgtgcctactgagctga 59
|||||||||||||||||||||||
Sbjct: 76 gcctcccgtgcctactgagctga 54
>32676_rno-mir-24-2:mirbase
Length = 108
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 77 cactggctcagttcagcaggaacaggagtc 106
||||||||||||||||||||||||||||||
Sbjct: 58 cactggctcagttcagcaggaacaggagtc 87
>34709_tni-mir-24-1:mirbase
Length = 70
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 77 cactggctcagttcagcaggaacaggagtc 106
||||||||||||||||||||||||||||||
Sbjct: 41 cactggctcagttcagcaggaacaggagtc 70
>25444_pma-mir-24:mirbase
Length = 94
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 77 cactggctcagttcagcaggaacaggagtctggtcca 113
||||||||||||||||||||||||| ||||| |||||
Sbjct: 55 cactggctcagttcagcaggaacagaagtctcgtcca 91
>25716_xtr-mir-24a:mirbase
Length = 67
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacaggag 104
|||||||||||||||||||||||||||||
Sbjct: 39 acactggctcagttcagcaggaacaggag 67
>25717_xtr-mir-24a:mirbase
Length = 67
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacaggag 104
|||||||||||||||||||||||||||||
Sbjct: 39 acactggctcagttcagcaggaacaggag 67
>26962_eca-mir-24-2:mirbase
Length = 68
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacaggag 104
|||||||||||||||||||||||||||||
Sbjct: 40 acactggctcagttcagcaggaacaggag 68
>27667_mml-mir-24-1:mirbase
Length = 68
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacaggag 104
|||||||||||||||||||||||||||||
Sbjct: 40 acactggctcagttcagcaggaacaggag 68
>28183_mne-mir-24-1:mirbase
Length = 68
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacaggag 104
|||||||||||||||||||||||||||||
Sbjct: 40 acactggctcagttcagcaggaacaggag 68
>28377_hsa-mir-24-1:mirbase
Length = 68
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacaggag 104
|||||||||||||||||||||||||||||
Sbjct: 40 acactggctcagttcagcaggaacaggag 68
>30056_ppa-mir-24-1:mirbase
Length = 68
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacaggag 104
|||||||||||||||||||||||||||||
Sbjct: 40 acactggctcagttcagcaggaacaggag 68
>30163_ptr-mir-24-1:mirbase
Length = 67
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacaggag 104
|||||||||||||||||||||||||||||
Sbjct: 39 acactggctcagttcagcaggaacaggag 67
>30768_ppy-mir-24-1:mirbase
Length = 68
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacaggag 104
|||||||||||||||||||||||||||||
Sbjct: 40 acactggctcagttcagcaggaacaggag 68
>31442_oan-mir-24:mirbase
Length = 84
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 77 cactggctcagttcagcaggaacaggagt 105
|||||||||||||||||||||||||||||
Sbjct: 49 cactggctcagttcagcaggaacaggagt 77
>31791_mmu-mir-24-1:mirbase
Length = 68
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacaggag 104
|||||||||||||||||||||||||||||
Sbjct: 40 acactggctcagttcagcaggaacaggag 68
>32675_rno-mir-24-1:mirbase
Length = 68
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacaggag 104
|||||||||||||||||||||||||||||
Sbjct: 40 acactggctcagttcagcaggaacaggag 68
>33147_bta-mir-24-1:mirbase
Length = 68
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacaggag 104
|||||||||||||||||||||||||||||
Sbjct: 40 acactggctcagttcagcaggaacaggag 68
>34228_dre-mir-24-1:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 77 cactggctcagttcagcaggaacaggagt 105
|||||||||||||||||||||||||||||
Sbjct: 46 cactggctcagttcagcaggaacaggagt 74
>27668_mml-mir-24-2:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacagga 103
||||||||||||||||||||||||||||
Sbjct: 46 acactggctcagttcagcaggaacagga 73
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 37 gcctcccgtgcctactgagctga 59
|||||||||||||||||||||||
Sbjct: 5 gcctcccgtgcctactgagctga 27
>28184_mne-mir-24-2:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacagga 103
||||||||||||||||||||||||||||
Sbjct: 46 acactggctcagttcagcaggaacagga 73
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 37 gcctcccgtgcctactgagctga 59
|||||||||||||||||||||||
Sbjct: 5 gcctcccgtgcctactgagctga 27
>34561_fru-mir-24-1:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 78 actggctcagttcagcaggaacaggagt 105
||||||||||||||||||||||||||||
Sbjct: 52 actggctcagttcagcaggaacaggagt 79
>34562_fru-mir-24-1:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 78 actggctcagttcagcaggaacaggagt 105
||||||||||||||||||||||||||||
Sbjct: 52 actggctcagttcagcaggaacaggagt 79
>25908_gga-mir-24:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 78 actggctcagttcagcaggaacaggag 104
|||||||||||||||||||||||||||
Sbjct: 42 actggctcagttcagcaggaacaggag 68
>26639_cfa-mir-24-1:mirbase
Length = 62
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacagg 102
|||||||||||||||||||||||||||
Sbjct: 36 acactggctcagttcagcaggaacagg 62
>26961_eca-mir-24:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 78 actggctcagttcagcaggaacaggag 104
|||||||||||||||||||||||||||
Sbjct: 42 actggctcagttcagcaggaacaggag 68
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 39 ctcccgtgcctactgagctga 59
|||||||||||||||||||||
Sbjct: 1 ctcccgtgcctactgagctga 21
>28270_ggo-mir-24:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacagg 102
|||||||||||||||||||||||||||
Sbjct: 46 acactggctcagttcagcaggaacagg 72
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 37 gcctcccgtgcctactgagctga 59
|||||||||||||||||||||||
Sbjct: 5 gcctcccgtgcctactgagctga 27
>28378_hsa-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacagg 102
|||||||||||||||||||||||||||
Sbjct: 46 acactggctcagttcagcaggaacagg 72
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 37 gcctcccgtgcctactgagctga 59
|||||||||||||||||||||||
Sbjct: 5 gcctcccgtgcctactgagctga 27
>30057_ppa-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacagg 102
|||||||||||||||||||||||||||
Sbjct: 46 acactggctcagttcagcaggaacagg 72
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 37 gcctcccgtgcctactgagctga 59
|||||||||||||||||||||||
Sbjct: 5 gcctcccgtgcctactgagctga 27
>30164_ptr-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacagg 102
|||||||||||||||||||||||||||
Sbjct: 46 acactggctcagttcagcaggaacagg 72
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 37 gcctcccgtgcctactgagctga 59
|||||||||||||||||||||||
Sbjct: 5 gcctcccgtgcctactgagctga 27
>30769_ppy-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacagg 102
|||||||||||||||||||||||||||
Sbjct: 46 acactggctcagttcagcaggaacagg 72
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 37 gcctcccgtgcctactgagctga 59
|||||||||||||||||||||||
Sbjct: 5 gcctcccgtgcctactgagctga 27
>33148_bta-mir-24-2:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 76 acactggctcagttcagcaggaacagg 102
|||||||||||||||||||||||||||
Sbjct: 46 acactggctcagttcagcaggaacagg 72
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 37 gcctcccgtgcctactgagctga 59
|||||||||||||||||||||||
Sbjct: 5 gcctcccgtgcctactgagctga 27
>34229_dre-mir-24-2:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 78 actggctcagttcagcaggaacaggagtctggtc 111
||||||||||||||||||||||||| | ||||||
Sbjct: 49 actggctcagttcagcaggaacaggggcctggtc 82
>26640_cfa-mir-24-2:mirbase
Length = 62
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 78 actggctcagttcagcaggaacagg 102
|||||||||||||||||||||||||
Sbjct: 38 actggctcagttcagcaggaacagg 62
>27345_mdo-mir-24-1:mirbase
Length = 57
Score = 50.1 bits (25), Expect = 4e-07
Identities = 49/56 (87%), Gaps = 2/56 (3%)
Strand = Plus / Plus
Query: 44 gtgcctactgagctgattacagtactg--tgcaaacactggctcagttcagcagga 97
||||||||||||||||| ||||| ||| | | ||||||||||||||||||||||
Sbjct: 2 gtgcctactgagctgataacagttctgattttacacactggctcagttcagcagga 57
>33928_ssc-mir-24-1:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 78 actggctcagttcagcaggaacagg 102
|||||||||||||||||||||||||
Sbjct: 48 actggctcagttcagcaggaacagg 72
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 37 gcctcccgtgcctactgagctga 59
|||||||||||||||||||||||
Sbjct: 5 gcctcccgtgcctactgagctga 27
>34563_fru-mir-24-2:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 79 ctggctcagttcagcaggaacaggagtctggtc 111
|||||||||||||||||||||||| | ||||||
Sbjct: 50 ctggctcagttcagcaggaacaggggactggtc 82
>34231_dre-mir-24-4:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 79 ctggctcagttcagcaggaacagg 102
||||||||||||||||||||||||
Sbjct: 55 ctggctcagttcagcaggaacagg 78
>34710_tni-mir-24-2:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 79 ctggctcagttcagcaggaacagg 102
||||||||||||||||||||||||
Sbjct: 50 ctggctcagttcagcaggaacagg 73
