miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26414_tgu-mir-26-1:mirbase
Length = 72
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 3 tggcctggttcaagtaatccaggataggct 32
||||||||||||||||||||||||||||||
Sbjct: 3 tggcctggttcaagtaatccaggataggct 32
>26415_tgu-mir-26-2:mirbase
Length = 72
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 3 tggcctggttcaagtaatccaggataggct 32
||||||||||||||||||||||||||||||
Sbjct: 3 tggcctggttcaagtaatccaggataggct 32
>34565_fru-mir-26:mirbase
Length = 88
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 4 ggcctggttcaagtaatccaggataggct 32
|||||||||||||||||||||||||||||
Sbjct: 8 ggcctggttcaagtaatccaggataggct 36
>34712_tni-mir-26:mirbase
Length = 96
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 4 ggcctggttcaagtaatccaggataggct 32
|||||||||||||||||||||||||||||
Sbjct: 13 ggcctggttcaagtaatccaggataggct 41
>25446_pma-mir-26a-1:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 5 gcctggttcaagtaatccaggataggct 32
||||||||||||||||||||||||||||
Sbjct: 8 gcctggttcaagtaatccaggataggct 35
>25721_xtr-mir-26-1:mirbase
Length = 85
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 5 gcctggttcaagtaatccaggataggct 32
||||||||||||||||||||||||||||
Sbjct: 8 gcctggttcaagtaatccaggataggct 35
>34235_dre-mir-26a-3:mirbase
Length = 137
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 6 cctggttcaagtaatccaggataggctt 33
||||||||||||||||||||||||||||
Sbjct: 34 cctggttcaagtaatccaggataggctt 61
>25909_gga-mir-26a:mirbase
Length = 77
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cctggttcaagtaatccaggataggct 32
|||||||||||||||||||||||||||
Sbjct: 5 cctggttcaagtaatccaggataggct 31
>27350_mdo-mir-26-3:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cctggttcaagtaatccaggataggct 32
|||||||||||||||||||||||||||
Sbjct: 2 cctggttcaagtaatccaggataggct 28
>26965_eca-mir-26a-2:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 tggcctggttcaagtaatccaggataggct 32
|||||| |||||||||||||||||||||||
Sbjct: 2 tggcctcgttcaagtaatccaggataggct 31
>27551_lla-mir-26a:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 tggcctggttcaagtaatccaggataggct 32
|||||| |||||||||||||||||||||||
Sbjct: 2 tggcctcgttcaagtaatccaggataggct 31
>27670_mml-mir-26a-1:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 tggcctggttcaagtaatccaggataggct 32
|||||| |||||||||||||||||||||||
Sbjct: 2 tggcctcgttcaagtaatccaggataggct 31
>28186_mne-mir-26a:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 tggcctggttcaagtaatccaggataggct 32
|||||| |||||||||||||||||||||||
Sbjct: 2 tggcctcgttcaagtaatccaggataggct 31
>28272_ggo-mir-26a:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 tggcctggttcaagtaatccaggataggct 32
|||||| |||||||||||||||||||||||
Sbjct: 2 tggcctcgttcaagtaatccaggataggct 31
>28380_hsa-mir-26a-1:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 tggcctggttcaagtaatccaggataggct 32
|||||| |||||||||||||||||||||||
Sbjct: 2 tggcctcgttcaagtaatccaggataggct 31
>30059_ppa-mir-26a:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 tggcctggttcaagtaatccaggataggct 32
|||||| |||||||||||||||||||||||
Sbjct: 2 tggcctcgttcaagtaatccaggataggct 31
>30166_ptr-mir-26a-1:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 tggcctggttcaagtaatccaggataggct 32
|||||| |||||||||||||||||||||||
Sbjct: 2 tggcctcgttcaagtaatccaggataggct 31
>30771_ppy-mir-26a:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 tggcctggttcaagtaatccaggataggct 32
|||||| |||||||||||||||||||||||
Sbjct: 2 tggcctcgttcaagtaatccaggataggct 31
>31794_mmu-mir-26a-1:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 tggcctggttcaagtaatccaggataggct 32
|||||| |||||||||||||||||||||||
Sbjct: 8 tggcctcgttcaagtaatccaggataggct 37
>32678_rno-mir-26a:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 tggcctggttcaagtaatccaggataggct 32
|||||| |||||||||||||||||||||||
Sbjct: 8 tggccttgttcaagtaatccaggataggct 37
>33150_bta-mir-26a-1:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 tggcctggttcaagtaatccaggataggct 32
|||||| |||||||||||||||||||||||
Sbjct: 8 tggcctcgttcaagtaatccaggataggct 37
>33153_bta-mir-26c:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 3 tggcctggttcaagtaatccaggataggct 32
|||||| |||||||||||||||||||||||
Sbjct: 83 tggcctcgttcaagtaatccaggataggct 54
>34236_dre-mir-26b:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 gcctggttcaagtaatccaggatagg 30
||||||||||||||||||||||||||
Sbjct: 14 gcctggttcaagtaatccaggatagg 39
>25448_pma-mir-26b:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 tggcctggttcaagtaatccaggatagg 30
||||||| ||||||||||||||||||||
Sbjct: 8 tggcctgattcaagtaatccaggatagg 35
>31443_oan-mir-26:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 ggttcaagtaatccaggataggct 32
||||||||||||||||||||||||
Sbjct: 12 ggttcaagtaatccaggataggct 35
>25447_pma-mir-26a-2:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 gttcaagtaatccaggataggct 32
|||||||||||||||||||||||
Sbjct: 18 gttcaagtaatccaggataggct 40
>34234_dre-mir-26a-2:mirbase
Length = 128
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 gttcaagtaatccaggataggct 32
|||||||||||||||||||||||
Sbjct: 36 gttcaagtaatccaggataggct 58
>25722_xtr-mir-26-2:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttcaagtaatccaggataggct 32
||||||||||||||||||||||
Sbjct: 12 ttcaagtaatccaggataggct 33
>26642_cfa-mir-26a-1:mirbase
Length = 61
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttcaagtaatccaggataggct 32
||||||||||||||||||||||
Sbjct: 1 ttcaagtaatccaggataggct 22
>26643_cfa-mir-26a-2:mirbase
Length = 60
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttcaagtaatccaggataggct 32
||||||||||||||||||||||
Sbjct: 1 ttcaagtaatccaggataggct 22
>26964_eca-mir-26a:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttcaagtaatccaggataggct 32
||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggct 35
>27348_mdo-mir-26-1:mirbase
Length = 69
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttcaagtaatccaggataggct 32
||||||||||||||||||||||
Sbjct: 1 ttcaagtaatccaggataggct 22
>27349_mdo-mir-26-2:mirbase
Length = 68
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttcaagtaatccaggataggct 32
||||||||||||||||||||||
Sbjct: 5 ttcaagtaatccaggataggct 26
>27671_mml-mir-26a-2:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttcaagtaatccaggataggct 32
||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggct 35
>28381_hsa-mir-26a-2:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttcaagtaatccaggataggct 32
||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggct 35
>30167_ptr-mir-26a-2:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttcaagtaatccaggataggct 32
||||||||||||||||||||||
Sbjct: 13 ttcaagtaatccaggataggct 34
>30772_ppy-mir-26a-2:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttcaagtaatccaggataggct 32
||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggct 35
>31795_mmu-mir-26a-2:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttcaagtaatccaggataggct 32
||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggct 35
>33151_bta-mir-26a-2:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttcaagtaatccaggataggct 32
||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggct 35
>33930_ssc-mir-26a:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ttcaagtaatccaggataggct 32
||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggct 35
