miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32678_rno-mir-26a:mirbase
Length = 90
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 32 ccttgttcaagtaatccaggataggctgt 60
|||||||||||||||||||||||||||||
Sbjct: 11 ccttgttcaagtaatccaggataggctgt 39
>25447_pma-mir-26a-2:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 35 tgttcaagtaatccaggataggctgt 60
||||||||||||||||||||||||||
Sbjct: 17 tgttcaagtaatccaggataggctgt 42
>31443_oan-mir-26:mirbase
Length = 81
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctgtc 61
||||||||||||||||||||||||||
Sbjct: 13 gttcaagtaatccaggataggctgtc 38
>25721_xtr-mir-26-1:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctgt 60
|||||||||||||||||||||||||
Sbjct: 13 gttcaagtaatccaggataggctgt 37
>25909_gga-mir-26a:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctgt 60
|||||||||||||||||||||||||
Sbjct: 9 gttcaagtaatccaggataggctgt 33
>26414_tgu-mir-26-1:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctgt 60
|||||||||||||||||||||||||
Sbjct: 10 gttcaagtaatccaggataggctgt 34
>26415_tgu-mir-26-2:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctgt 60
|||||||||||||||||||||||||
Sbjct: 10 gttcaagtaatccaggataggctgt 34
>26643_cfa-mir-26a-2:mirbase
Length = 60
Score = 50.1 bits (25), Expect = 4e-07
Identities = 49/56 (87%), Gaps = 2/56 (3%)
Strand = Plus / Plus
Query: 37 ttcaagtaatccaggataggctg--tctgtcctggaggcctattcatgattacttg 90
||||||||||||||||||||||| || ||| ||||||||||| ||||||||||
Sbjct: 1 ttcaagtaatccaggataggctgtttccgtctgtgaggcctattcttgattacttg 56
>26965_eca-mir-26a-2:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctgt 60
|||||||||||||||||||||||||
Sbjct: 9 gttcaagtaatccaggataggctgt 33
>27551_lla-mir-26a:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctgt 60
|||||||||||||||||||||||||
Sbjct: 9 gttcaagtaatccaggataggctgt 33
>27670_mml-mir-26a-1:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctgt 60
|||||||||||||||||||||||||
Sbjct: 9 gttcaagtaatccaggataggctgt 33
>28186_mne-mir-26a:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctgt 60
|||||||||||||||||||||||||
Sbjct: 9 gttcaagtaatccaggataggctgt 33
>28272_ggo-mir-26a:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctgt 60
|||||||||||||||||||||||||
Sbjct: 9 gttcaagtaatccaggataggctgt 33
>28380_hsa-mir-26a-1:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctgt 60
|||||||||||||||||||||||||
Sbjct: 9 gttcaagtaatccaggataggctgt 33
>30059_ppa-mir-26a:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctgt 60
|||||||||||||||||||||||||
Sbjct: 9 gttcaagtaatccaggataggctgt 33
>30166_ptr-mir-26a-1:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctgt 60
|||||||||||||||||||||||||
Sbjct: 9 gttcaagtaatccaggataggctgt 33
>30771_ppy-mir-26a:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctgt 60
|||||||||||||||||||||||||
Sbjct: 9 gttcaagtaatccaggataggctgt 33
>31794_mmu-mir-26a-1:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctgt 60
|||||||||||||||||||||||||
Sbjct: 15 gttcaagtaatccaggataggctgt 39
>31795_mmu-mir-26a-2:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 4e-07
Identities = 49/56 (87%), Gaps = 2/56 (3%)
Strand = Plus / Plus
Query: 37 ttcaagtaatccaggataggc--tgtctgtcctggaggcctattcatgattacttg 90
||||||||||||||||||||| |||| |||| ||||||| ||| ||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgtgtccgtccatgaggcctgttcttgattacttg 69
>33150_bta-mir-26a-1:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctgt 60
|||||||||||||||||||||||||
Sbjct: 15 gttcaagtaatccaggataggctgt 39
>33153_bta-mir-26c:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 36 gttcaagtaatccaggataggctgt 60
|||||||||||||||||||||||||
Sbjct: 76 gttcaagtaatccaggataggctgt 52
>25446_pma-mir-26a-1:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctg 59
||||||||||||||||||||||||
Sbjct: 13 gttcaagtaatccaggataggctg 36
>25722_xtr-mir-26-2:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 ttcaagtaatccaggataggctgt 60
||||||||||||||||||||||||
Sbjct: 12 ttcaagtaatccaggataggctgt 35
>26642_cfa-mir-26a-1:mirbase
Length = 61
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 ttcaagtaatccaggataggctgt 60
||||||||||||||||||||||||
Sbjct: 1 ttcaagtaatccaggataggctgt 24
>26964_eca-mir-26a:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 ttcaagtaatccaggataggctgt 60
||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgt 37
>27348_mdo-mir-26-1:mirbase
Length = 69
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 ttcaagtaatccaggataggctgt 60
||||||||||||||||||||||||
Sbjct: 1 ttcaagtaatccaggataggctgt 24
>27349_mdo-mir-26-2:mirbase
Length = 68
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 ttcaagtaatccaggataggctgt 60
||||||||||||||||||||||||
Sbjct: 5 ttcaagtaatccaggataggctgt 28
>27350_mdo-mir-26-3:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctg 59
||||||||||||||||||||||||
Sbjct: 6 gttcaagtaatccaggataggctg 29
>27671_mml-mir-26a-2:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 ttcaagtaatccaggataggctgt 60
||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgt 37
>28381_hsa-mir-26a-2:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 ttcaagtaatccaggataggctgt 60
||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgt 37
>30167_ptr-mir-26a-2:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 ttcaagtaatccaggataggctgt 60
||||||||||||||||||||||||
Sbjct: 13 ttcaagtaatccaggataggctgt 36
>30772_ppy-mir-26a-2:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 ttcaagtaatccaggataggctgt 60
||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgt 37
>33151_bta-mir-26a-2:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 ttcaagtaatccaggataggctgt 60
||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgt 37
>33930_ssc-mir-26a:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 ttcaagtaatccaggataggctgt 60
||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgt 37
>34565_fru-mir-26:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctg 59
||||||||||||||||||||||||
Sbjct: 14 gttcaagtaatccaggataggctg 37
>34712_tni-mir-26:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggctg 59
||||||||||||||||||||||||
Sbjct: 19 gttcaagtaatccaggataggctg 42
>34233_dre-mir-26a-1:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggct 58
|||||||||||||||||||||||
Sbjct: 10 gttcaagtaatccaggataggct 32
>34235_dre-mir-26a-3:mirbase
Length = 137
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggataggct 58
|||||||||||||||||||||||
Sbjct: 38 gttcaagtaatccaggataggct 60
>34236_dre-mir-26b:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 36 gttcaagtaatccaggatagg 56
|||||||||||||||||||||
Sbjct: 19 gttcaagtaatccaggatagg 39
>25448_pma-mir-26b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 37 ttcaagtaatccaggatagg 56
||||||||||||||||||||
Sbjct: 16 ttcaagtaatccaggatagg 35
