miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25721_xtr-mir-26-1:mirbase
Length = 85
Score = 63.9 bits (32), Expect = 2e-11
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 13 tgcctggttcaagtaatccaggataggttagttcccactagtacggcctattcttggtta 72
||||||||||||||||||||||||||| | |||| || |||||||| ||||| |||
Sbjct: 7 tgcctggttcaagtaatccaggataggctgtttcctcaaagcacggcctactcttgatta 66
Query: 73 cttgtttcagga 84
||||||||||||
Sbjct: 67 cttgtttcagga 78
>34565_fru-mir-26:mirbase
Length = 88
Score = 61.9 bits (31), Expect = 8e-11
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggataggttagttcccactagtacggcctattcttggttac 73
|||||||||||||||||||||||||| | ||| | || | |||||||||||||| ||||
Sbjct: 9 gcctggttcaagtaatccaggataggctggttaaccct-gcacggcctattcttgattac 67
Query: 74 ttgtttcagga 84
|||| ||||||
Sbjct: 68 ttgtgtcagga 78
>34712_tni-mir-26:mirbase
Length = 96
Score = 61.9 bits (31), Expect = 8e-11
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggataggttagttcccactagtacggcctattcttggttac 73
|||||||||||||||||||||||||| | ||| | || | |||||||||||||| ||||
Sbjct: 14 gcctggttcaagtaatccaggataggctggttaaccct-gcacggcctattcttgattac 72
Query: 74 ttgtttcagga 84
|||| ||||||
Sbjct: 73 ttgtgtcagga 83
>25446_pma-mir-26a-1:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggatagg 39
||||||||||||||||||||||||||
Sbjct: 8 gcctggttcaagtaatccaggatagg 33
>26414_tgu-mir-26-1:mirbase
Length = 72
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggatagg 39
||||||||||||||||||||||||||
Sbjct: 5 gcctggttcaagtaatccaggatagg 30
>26415_tgu-mir-26-2:mirbase
Length = 72
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggatagg 39
||||||||||||||||||||||||||
Sbjct: 5 gcctggttcaagtaatccaggatagg 30
>34233_dre-mir-26a-1:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggatagg 39
||||||||||||||||||||||||||
Sbjct: 5 gcctggttcaagtaatccaggatagg 30
>25909_gga-mir-26a:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 cctggttcaagtaatccaggatagg 39
|||||||||||||||||||||||||
Sbjct: 5 cctggttcaagtaatccaggatagg 29
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 ggcctattcttggttacttg 76
||||||||||||||||||||
Sbjct: 47 ggcctattcttggttacttg 66
>27350_mdo-mir-26-3:mirbase
Length = 70
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 cctggttcaagtaatccaggatagg 39
|||||||||||||||||||||||||
Sbjct: 2 cctggttcaagtaatccaggatagg 26
>34235_dre-mir-26a-3:mirbase
Length = 137
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 cctggttcaagtaatccaggatagg 39
|||||||||||||||||||||||||
Sbjct: 34 cctggttcaagtaatccaggatagg 58
>25448_pma-mir-26b:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggataggtt 41
||||| ||||||||||||||||||||||
Sbjct: 10 gcctgattcaagtaatccaggataggtt 37
>26964_eca-mir-26a:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 5e-06
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 20 ttcaagtaatccaggataggttagttcccactagtacggcctattcttggttacttgttt 79
|||||||||||||||||||| | |||| || || |||||||||||| ||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgtttccatct-gtgaggcctattcttgattacttgttt 72
Query: 80 caggagg 86
| |||||
Sbjct: 73 ctggagg 79
>27671_mml-mir-26a-2:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 5e-06
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 20 ttcaagtaatccaggataggttagttcccactagtacggcctattcttggttacttgttt 79
|||||||||||||||||||| | |||| || || |||||||||||| ||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgtttccatct-gtgaggcctattcttgattacttgttt 72
Query: 80 caggagg 86
| |||||
Sbjct: 73 ctggagg 79
>28381_hsa-mir-26a-2:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 5e-06
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 20 ttcaagtaatccaggataggttagttcccactagtacggcctattcttggttacttgttt 79
|||||||||||||||||||| | |||| || || |||||||||||| ||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgtttccatct-gtgaggcctattcttgattacttgttt 72
Query: 80 caggagg 86
| |||||
Sbjct: 73 ctggagg 79
>30167_ptr-mir-26a-2:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 5e-06
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 20 ttcaagtaatccaggataggttagttcccactagtacggcctattcttggttacttgttt 79
|||||||||||||||||||| | |||| || || |||||||||||| ||||||||||
Sbjct: 13 ttcaagtaatccaggataggctgtttccatct-gtgaggcctattcttgattacttgttt 71
Query: 80 caggagg 86
| |||||
Sbjct: 72 ctggagg 78
>30772_ppy-mir-26a-2:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 5e-06
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 20 ttcaagtaatccaggataggttagttcccactagtacggcctattcttggttacttgttt 79
|||||||||||||||||||| | |||| || || |||||||||||| ||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgtttccatct-gtgaggcctattcttgattacttgttt 72
Query: 80 caggagg 86
| |||||
Sbjct: 73 ctggagg 79
>33151_bta-mir-26a-2:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 5e-06
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 20 ttcaagtaatccaggataggttagttcccactagtacggcctattcttggttacttgttt 79
|||||||||||||||||||| | |||| || || |||||||||||| ||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgtttccatct-gtgaggcctattcttgattacttgttt 72
Query: 80 caggagg 86
| |||||
Sbjct: 73 ctggagg 79
>33930_ssc-mir-26a:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 5e-06
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 20 ttcaagtaatccaggataggttagttcccactagtacggcctattcttggttacttgttt 79
|||||||||||||||||||| | |||| || || |||||||||||| ||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgtttccatct-gtgaggcctattcttgattacttgttt 72
Query: 80 caggagg 86
| |||||
Sbjct: 73 ctggagg 79
>26965_eca-mir-26a-2:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggatagg 39
|||| |||||||||||||||||||||
Sbjct: 4 gcctcgttcaagtaatccaggatagg 29
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 ggcctattcttggttacttg 76
||||||||||||||||||||
Sbjct: 47 ggcctattcttggttacttg 66
>27551_lla-mir-26a:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggatagg 39
|||| |||||||||||||||||||||
Sbjct: 4 gcctcgttcaagtaatccaggatagg 29
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 ggcctattcttggttacttg 76
||||||||||||||||||||
Sbjct: 47 ggcctattcttggttacttg 66
>27670_mml-mir-26a-1:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggatagg 39
|||| |||||||||||||||||||||
Sbjct: 4 gcctcgttcaagtaatccaggatagg 29
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 ggcctattcttggttacttg 76
||||||||||||||||||||
Sbjct: 47 ggcctattcttggttacttg 66
>28186_mne-mir-26a:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggatagg 39
|||| |||||||||||||||||||||
Sbjct: 4 gcctcgttcaagtaatccaggatagg 29
>28272_ggo-mir-26a:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggatagg 39
|||| |||||||||||||||||||||
Sbjct: 4 gcctcgttcaagtaatccaggatagg 29
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 ggcctattcttggttacttg 76
||||||||||||||||||||
Sbjct: 47 ggcctattcttggttacttg 66
>28380_hsa-mir-26a-1:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggatagg 39
|||| |||||||||||||||||||||
Sbjct: 4 gcctcgttcaagtaatccaggatagg 29
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 ggcctattcttggttacttg 76
||||||||||||||||||||
Sbjct: 47 ggcctattcttggttacttg 66
>30059_ppa-mir-26a:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggatagg 39
|||| |||||||||||||||||||||
Sbjct: 4 gcctcgttcaagtaatccaggatagg 29
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 ggcctattcttggttacttg 76
||||||||||||||||||||
Sbjct: 47 ggcctattcttggttacttg 66
>30166_ptr-mir-26a-1:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggatagg 39
|||| |||||||||||||||||||||
Sbjct: 4 gcctcgttcaagtaatccaggatagg 29
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 ggcctattcttggttacttg 76
||||||||||||||||||||
Sbjct: 47 ggcctattcttggttacttg 66
>30771_ppy-mir-26a:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggatagg 39
|||| |||||||||||||||||||||
Sbjct: 4 gcctcgttcaagtaatccaggatagg 29
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 ggcctattcttggttacttg 76
||||||||||||||||||||
Sbjct: 47 ggcctattcttggttacttg 66
>31443_oan-mir-26:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 ggttcaagtaatccaggatagg 39
||||||||||||||||||||||
Sbjct: 12 ggttcaagtaatccaggatagg 33
>31794_mmu-mir-26a-1:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggatagg 39
|||| |||||||||||||||||||||
Sbjct: 10 gcctcgttcaagtaatccaggatagg 35
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 ggcctattcttggttacttg 76
||||||||||||||||||||
Sbjct: 53 ggcctattcttggttacttg 72
>32678_rno-mir-26a:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggatagg 39
|||| |||||||||||||||||||||
Sbjct: 10 gccttgttcaagtaatccaggatagg 35
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 ggcctattcttggttacttg 76
||||||||||||||||||||
Sbjct: 53 ggcctattcttggttacttg 72
>33150_bta-mir-26a-1:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 gcctggttcaagtaatccaggatagg 39
|||| |||||||||||||||||||||
Sbjct: 10 gcctcgttcaagtaatccaggatagg 35
>33153_bta-mir-26c:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 14 gcctggttcaagtaatccaggatagg 39
|||| |||||||||||||||||||||
Sbjct: 81 gcctcgttcaagtaatccaggatagg 56
>25447_pma-mir-26a-2:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 19 gttcaagtaatccaggatagg 39
|||||||||||||||||||||
Sbjct: 18 gttcaagtaatccaggatagg 38
>26643_cfa-mir-26a-2:mirbase
Length = 60
Score = 42.1 bits (21), Expect = 7e-05
Identities = 52/61 (85%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 20 ttcaagtaatccaggataggttagttcccactagtacggcctattcttggttacttgttt 79
|||||||||||||||||||| | |||| || || |||||||||||| ||||||||||
Sbjct: 1 ttcaagtaatccaggataggctgtttccgtct-gtgaggcctattcttgattacttgttt 59
Query: 80 c 80
|
Sbjct: 60 c 60
>34234_dre-mir-26a-2:mirbase
Length = 128
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 19 gttcaagtaatccaggatagg 39
|||||||||||||||||||||
Sbjct: 36 gttcaagtaatccaggatagg 56
>25722_xtr-mir-26-2:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 20 ttcaagtaatccaggatagg 39
||||||||||||||||||||
Sbjct: 12 ttcaagtaatccaggatagg 31
>26642_cfa-mir-26a-1:mirbase
Length = 61
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 20 ttcaagtaatccaggatagg 39
||||||||||||||||||||
Sbjct: 1 ttcaagtaatccaggatagg 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 57 ggcctattcttggttacttg 76
||||||||||||||||||||
Sbjct: 38 ggcctattcttggttacttg 57
>27348_mdo-mir-26-1:mirbase
Length = 69
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 20 ttcaagtaatccaggatagg 39
||||||||||||||||||||
Sbjct: 1 ttcaagtaatccaggatagg 20
>27349_mdo-mir-26-2:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 20 ttcaagtaatccaggatagg 39
||||||||||||||||||||
Sbjct: 5 ttcaagtaatccaggatagg 24
>31795_mmu-mir-26a-2:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 20 ttcaagtaatccaggatagg 39
||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggatagg 33
