miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>24656_bfl-mir-31:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 atggcaagatgttggcatagctgtt 31
|||||||||||||||||||||||||
Sbjct: 18 atggcaagatgttggcatagctgtt 42
>25922_gga-mir-31:mirbase
Length = 94
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctgttaa 33
|||||||||||||||||||||||||
Sbjct: 26 ggcaagatgttggcatagctgttaa 50
>31456_oan-mir-31:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 3 agagatggcaagatgttggcatagctgtt 31
||||| |||||||||||||||||||||||
Sbjct: 12 agagaaggcaagatgttggcatagctgtt 40
>25738_xtr-mir-31:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctgtt 31
|||||||||||||||||||||||
Sbjct: 18 ggcaagatgttggcatagctgtt 40
>26429_tgu-mir-31:mirbase
Length = 109
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctgtt 31
|||||||||||||||||||||||
Sbjct: 26 ggcaagatgttggcatagctgtt 48
>27357_mdo-mir-31:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctgtt 31
|||||||||||||||||||||||
Sbjct: 13 ggcaagatgttggcatagctgtt 35
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 5 agatggcaagatgttggcatagc 27
||||||||| |||||||||||||
Sbjct: 71 agatggcaatatgttggcatagc 49
>34869_sko-mir-31:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctgtt 31
|||||||||||||||||||||||
Sbjct: 22 ggcaagatgttggcatagctgtt 44
>24814_cin-mir-31:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 atggcaagatgttggcatagct 28
||||||||||||||||||||||
Sbjct: 15 atggcaagatgttggcatagct 36
>25319_csa-mir-31:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 atggcaagatgttggcatagct 28
||||||||||||||||||||||
Sbjct: 15 atggcaagatgttggcatagct 36
>34813_spu-mir-31:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctgt 30
||||||||||||||||||||||
Sbjct: 20 ggcaagatgttggcatagctgt 41
>35182_aae-mir-31:mirbase
Length = 149
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 tggcaagatgttggcatagctg 29
||||||||||||||||||||||
Sbjct: 51 tggcaagatgttggcatagctg 72
>36013_cqu-mir-31:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 tggcaagatgttggcatagctg 29
||||||||||||||||||||||
Sbjct: 12 tggcaagatgttggcatagctg 33
>38856_lgi-mir-31:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctg 29
|||||||||||||||||||||
Sbjct: 22 ggcaagatgttggcatagctg 42
>38737_cte-mir-31:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctg 29
|||||||||||||||||||||
Sbjct: 22 ggcaagatgttggcatagctg 42
>38622_ppc-mir-72:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctg 29
|||||||||||||||||||||
Sbjct: 25 ggcaagatgttggcatagctg 45
>38534_crm-mir-72:mirbase
Length = 113
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctg 29
|||||||||||||||||||||
Sbjct: 22 ggcaagatgttggcatagctg 42
>33171_bta-mir-31:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 3 agagatggcaagatgttggcatagc 27
||||||||||| |||||||||||||
Sbjct: 86 agagatggcaatatgttggcatagc 62
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctgtt 31
||||||||| |||||||||||||
Sbjct: 26 ggcaagatgctggcatagctgtt 48
>38106_bma-mir-72:mirbase
Length = 115
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctg 29
|||||||||||||||||||||
Sbjct: 19 ggcaagatgttggcatagctg 39
>38308_cel-mir-72:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctg 29
|||||||||||||||||||||
Sbjct: 18 ggcaagatgttggcatagctg 38
>26659_cfa-mir-31:mirbase
Length = 59
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctgtt 31
||||||||| |||||||||||||
Sbjct: 2 ggcaagatgctggcatagctgtt 24
>26980_eca-mir-31:mirbase
Length = 67
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctgtt 31
||||||||| |||||||||||||
Sbjct: 9 ggcaagatgctggcatagctgtt 31
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 5 agatggcaagatgttggcatagc 27
||||||||| |||||||||||||
Sbjct: 67 agatggcaatatgttggcatagc 45
>27687_mml-mir-31:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctgtt 31
||||||||| |||||||||||||
Sbjct: 9 ggcaagatgctggcatagctgtt 31
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 5 agatggcaagatgttggcatagc 27
||||||||| |||||||||||||
Sbjct: 67 agatggcaatatgttggcatagc 45
>28194_mne-mir-31:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctgtt 31
||||||||| |||||||||||||
Sbjct: 9 ggcaagatgctggcatagctgtt 31
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 5 agatggcaagatgttggcatagc 27
||||||||| |||||||||||||
Sbjct: 67 agatggcaatatgttggcatagc 45
>28282_ggo-mir-31:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctgtt 31
||||||||| |||||||||||||
Sbjct: 9 ggcaagatgctggcatagctgtt 31
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 5 agatggcaagatgttggcatagc 27
||||||||| |||||||||||||
Sbjct: 67 agatggcaatatgttggcatagc 45
>28397_hsa-mir-31:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctgtt 31
||||||||| |||||||||||||
Sbjct: 9 ggcaagatgctggcatagctgtt 31
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 5 agatggcaagatgttggcatagc 27
||||||||| |||||||||||||
Sbjct: 67 agatggcaatatgttggcatagc 45
>30069_ppa-mir-31:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctgtt 31
||||||||| |||||||||||||
Sbjct: 9 ggcaagatgctggcatagctgtt 31
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 5 agatggcaagatgttggcatagc 27
||||||||| |||||||||||||
Sbjct: 67 agatggcaatatgttggcatagc 45
>30183_ptr-mir-31:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctgtt 31
||||||||| |||||||||||||
Sbjct: 9 ggcaagatgctggcatagctgtt 31
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 5 agatggcaagatgttggcatagc 27
||||||||| |||||||||||||
Sbjct: 67 agatggcaatatgttggcatagc 45
>30787_ppy-mir-31:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctgtt 31
||||||||| |||||||||||||
Sbjct: 9 ggcaagatgctggcatagctgtt 31
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 5 agatggcaagatgttggcatagc 27
||||||||| |||||||||||||
Sbjct: 67 agatggcaatatgttggcatagc 45
>31812_mmu-mir-31:mirbase
Length = 106
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctgtt 31
||||||||| |||||||||||||
Sbjct: 29 ggcaagatgctggcatagctgtt 51
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 5 agatggcaagatgttggcatagc 27
||||||||| |||||||||||||
Sbjct: 87 agatggcaatatgttggcatagc 65
>32694_rno-mir-31:mirbase
Length = 106
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 ggcaagatgttggcatagctgtt 31
||||||||| |||||||||||||
Sbjct: 29 ggcaagatgctggcatagctgtt 51
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 5 agatggcaagatgttggcatagc 27
||||||||| |||||||||||||
Sbjct: 87 agatggcaatatgttggcatagc 65
>33042_rno-mir-3554:mirbase
Length = 118
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 5 agatggcaagatgttggcatagc 27
||||||||| |||||||||||||
Sbjct: 26 agatggcaatatgttggcatagc 48
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 9 ggcaagatgttggcatagctgtt 31
||||||||| |||||||||||||
Sbjct: 84 ggcaagatgctggcatagctgtt 62
>37427_dwi-mir-31a:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 8 tggcaagatgttggcatagctgttaat 34
||||||||||| |||||||||| ||||
Sbjct: 15 tggcaagatgtcggcatagctgataat 41
