miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>30191_ptr-mir-92-2:mirbase
Length = 74
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctgtga 78
|||||||||||||||||||||||||||
Sbjct: 44 aagtattgcacttgtcccggcctgtga 70
>25662_xla-mir-92a-2:mirbase
Length = 76
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||||
Sbjct: 46 aagtattgcacttgtcccggcctgtg 71
>25748_xtr-mir-92a-2:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||||
Sbjct: 43 aagtattgcacttgtcccggcctgtg 68
>26989_eca-mir-92a-2:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||||
Sbjct: 45 aagtattgcacttgtcccggcctgtg 70
>27498_age-mir-92-2:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||||
Sbjct: 45 aagtattgcacttgtcccggcctgtg 70
>27559_lla-mir-92-2:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||||
Sbjct: 45 aagtattgcacttgtcccggcctgtg 70
>27606_sla-mir-92-2:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||||
Sbjct: 45 aagtattgcacttgtcccggcctgtg 70
>27696_mml-mir-92a-2:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||||
Sbjct: 45 aagtattgcacttgtcccggcctgtg 70
>28198_mne-mir-92:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||||
Sbjct: 45 aagtattgcacttgtcccggcctgtg 70
>28287_ggo-mir-92-2:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||||
Sbjct: 45 aagtattgcacttgtcccggcctgtg 70
>28406_hsa-mir-92a-2:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||||
Sbjct: 45 aagtattgcacttgtcccggcctgtg 70
>30074_ppa-mir-92-2:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||||
Sbjct: 45 aagtattgcacttgtcccggcctgtg 70
>30796_ppy-mir-92-2:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||||
Sbjct: 45 aagtattgcacttgtcccggcctgtg 70
>31406_lca-mir-92-2:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||||
Sbjct: 45 aagtattgcacttgtcccggcctgtg 70
>33178_bta-mir-92:mirbase
Length = 68
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||||
Sbjct: 38 aagtattgcacttgtcccggcctgtg 63
>33951_ssc-mir-92a-2:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||||
Sbjct: 48 aagtattgcacttgtcccggcctgtg 73
>26437_tgu-mir-92-2:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 agtattgcacttgtcccggcctgtg 77
|||||||||||||||||||||||||
Sbjct: 59 agtattgcacttgtcccggcctgtg 83
>26667_cfa-mir-92a-2:mirbase
Length = 61
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||||
Sbjct: 37 aagtattgcacttgtcccggcctgt 61
>31463_oan-mir-92a-1:mirbase
Length = 120
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 agtattgcacttgtcccggcctgtg 77
|||||||||||||||||||||||||
Sbjct: 70 agtattgcacttgtcccggcctgtg 94
>34256_dre-mir-92a-1:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 3e-07
Identities = 61/72 (84%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 7 tccctttctttgcaggttgggatcggccgcaatgctctgtgct--ggaagtattgcactt 64
||||||||| |||||||||||| || |||||||| |||| | | | |||||||||||
Sbjct: 4 tccctttctgcgcaggttgggattggtagcaatgctgtgtgttttgaaggtattgcactt 63
Query: 65 gtcccggcctgt 76
||||||||||||
Sbjct: 64 gtcccggcctgt 75
>25661_xla-mir-92a-1:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 agtattgcacttgtcccggcctgt 76
||||||||||||||||||||||||
Sbjct: 47 agtattgcacttgtcccggcctgt 70
>25747_xtr-mir-92a-1:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 agtattgcacttgtcccggcctgt 76
||||||||||||||||||||||||
Sbjct: 47 agtattgcacttgtcccggcctgt 70
>27361_mdo-mir-92:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 agtattgcacttgtcccggcctgt 76
||||||||||||||||||||||||
Sbjct: 46 agtattgcacttgtcccggcctgt 69
>31820_mmu-mir-92a-2:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctg 75
||||||||||||||||||||||||
Sbjct: 52 aagtattgcacttgtcccggcctg 75
>32700_rno-mir-92a-1:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 agtattgcacttgtcccggcctgt 76
||||||||||||||||||||||||
Sbjct: 46 agtattgcacttgtcccggcctgt 69
>32701_rno-mir-92a-2:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 aagtattgcacttgtcccggcctg 75
||||||||||||||||||||||||
Sbjct: 52 aagtattgcacttgtcccggcctg 75
>34576_fru-mir-92-1:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||
Sbjct: 48 gtattgcacttgtcccggcctgtg 71
>34577_fru-mir-92-2:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||
Sbjct: 37 gtattgcacttgtcccggcctgtg 60
>34723_tni-mir-92-1:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||
Sbjct: 48 gtattgcacttgtcccggcctgtg 71
>34724_tni-mir-92-2:mirbase
Length = 72
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgtg 77
||||||||||||||||||||||||
Sbjct: 46 gtattgcacttgtcccggcctgtg 69
>25928_gga-mir-92:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggcctgt 69
>26436_tgu-mir-92-1:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||
Sbjct: 40 gtattgcacttgtcccggcctgt 62
>26666_cfa-mir-92a-1:mirbase
Length = 59
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||
Sbjct: 37 gtattgcacttgtcccggcctgt 59
>26988_eca-mir-92a:mirbase
Length = 61
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||
Sbjct: 39 gtattgcacttgtcccggcctgt 61
>27497_age-mir-92-1:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggcctgt 69
>27558_lla-mir-92-1:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggcctgt 69
>27605_sla-mir-92-1:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggcctgt 69
>27695_mml-mir-92a-1:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggcctgt 69
>28286_ggo-mir-92-1:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggcctgt 69
>28405_hsa-mir-92a-1:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggcctgt 69
>30073_ppa-mir-92-1:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggcctgt 69
>30190_ptr-mir-92-1:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggcctgt 69
>30795_ppy-mir-92-1:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggcctgt 69
>31405_lca-mir-92-1:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggcctgt 69
>31464_oan-mir-92a-2:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||
Sbjct: 66 gtattgcacttgtcccggcctgt 88
>31819_mmu-mir-92a-1:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||
Sbjct: 49 gtattgcacttgtcccggcctgt 71
>33179_bta-mir-92a:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggcctgt 69
>33950_ssc-mir-92a-1:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtattgcacttgtcccggcctgt 76
|||||||||||||||||||||||
Sbjct: 47 gtattgcacttgtcccggcctgt 69
>24666_bfl-mir-92a-1:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 53 agtattgcacttgtcccggcct 74
||||||||||||||||||||||
Sbjct: 58 agtattgcacttgtcccggcct 79
>34819_spu-mir-92b:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tattgcacttgtcccggcctg 75
|||||||||||||||||||||
Sbjct: 61 tattgcacttgtcccggcctg 81
>34874_sko-mir-92b:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tattgcacttgtcccggcctg 75
|||||||||||||||||||||
Sbjct: 60 tattgcacttgtcccggcctg 80
>38863_lgi-mir-92:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 attgcacttgtcccggcctg 75
||||||||||||||||||||
Sbjct: 61 attgcacttgtcccggcctg 80
>38748_cte-mir-92c:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 attgcacttgtcccggcctg 75
||||||||||||||||||||
Sbjct: 61 attgcacttgtcccggcctg 80
>24667_bfl-mir-92a-2:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 tattgcacttgtcccggcct 74
||||||||||||||||||||
Sbjct: 57 tattgcacttgtcccggcct 76
>24668_bfl-mir-92a-3:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 tattgcacttgtcccggcct 74
||||||||||||||||||||
Sbjct: 57 tattgcacttgtcccggcct 76
>24819_cin-mir-92b:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 tattgcacttgtcccggcct 74
||||||||||||||||||||
Sbjct: 66 tattgcacttgtcccggcct 85
>34818_spu-mir-92a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 tattgcacttgtcccggcct 74
||||||||||||||||||||
Sbjct: 61 tattgcacttgtcccggcct 80
>34873_sko-mir-92a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 tattgcacttgtcccggcct 74
||||||||||||||||||||
Sbjct: 61 tattgcacttgtcccggcct 80
>35188_aae-mir-92a:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 tattgcacttgtcccggcct 74
||||||||||||||||||||
Sbjct: 52 tattgcacttgtcccggcct 71
>35189_aae-mir-92b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 attgcacttgtcccggcctg 75
||||||||||||||||||||
Sbjct: 53 attgcacttgtcccggcctg 72
>35286_aga-mir-92a:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 tattgcacttgtcccggcct 74
||||||||||||||||||||
Sbjct: 51 tattgcacttgtcccggcct 70
>35287_aga-mir-92b:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 attgcacttgtcccggcctg 75
||||||||||||||||||||
Sbjct: 55 attgcacttgtcccggcctg 74
>35363_ame-mir-92a:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 tattgcacttgtcccggcct 74
||||||||||||||||||||
Sbjct: 63 tattgcacttgtcccggcct 82
>36018_cqu-mir-92-1:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 tattgcacttgtcccggcct 74
||||||||||||||||||||
Sbjct: 54 tattgcacttgtcccggcct 73
>36019_cqu-mir-92-2:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 tattgcacttgtcccggcct 74
||||||||||||||||||||
Sbjct: 51 tattgcacttgtcccggcct 70
>37577_ngi-mir-92a:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 tattgcacttgtcccggcct 74
||||||||||||||||||||
Sbjct: 57 tattgcacttgtcccggcct 76
>37609_nlo-mir-92a:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 tattgcacttgtcccggcct 74
||||||||||||||||||||
Sbjct: 57 tattgcacttgtcccggcct 76
>37647_nvi-mir-92a:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 tattgcacttgtcccggcct 74
||||||||||||||||||||
Sbjct: 62 tattgcacttgtcccggcct 81
>37733_tca-mir-92b:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 attgcacttgtcccggcctg 75
||||||||||||||||||||
Sbjct: 53 attgcacttgtcccggcctg 72
>37734_tca-mir-92b:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 attgcacttgtcccggcctg 75
||||||||||||||||||||
Sbjct: 53 attgcacttgtcccggcctg 72
