miRNEST 2.0, an integrative microRNA resource :: BLAST
>30802_ppy-mir-99a:mirbase
Length = 81
Score = 61.9 bits (31), Expect = 7e-11
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtgataagtttgatggcacaagctcgattctatgggtctct 73
|||||||||||||||||||||| ||| | || ||||||||||| |||||||||||| |
Sbjct: 13 aacccgtagatccgatcttgtggtaaagtggaccgcacaagctcgcttctatgggtctgt 72
Query: 74 gtc 76
|||
Sbjct: 73 gtc 75
>26673_cfa-mir-99a-1:mirbase
Length = 59
Score = 60.0 bits (30), Expect = 3e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtgataagtttgatggcacaagctcgattctatgggtct 71
|||||||||||||||||||||| | | | || |||||||||||| ||||||||||||
Sbjct: 1 aacccgtagatccgatcttgtggtgaagtggacggcacaagctcgcttctatgggtct 58
>27562_lla-mir-99a:mirbase
Length = 81
Score = 54.0 bits (27), Expect = 2e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtgataagtttgatggcacaagctcgattctatgggtctct 73
|||||||||||||||||||||| | | | || ||||||||||| |||||||||||| |
Sbjct: 13 aacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttctatgggtctgt 72
Query: 74 gtc 76
|||
Sbjct: 73 gtc 75
>27702_mml-mir-99a:mirbase
Length = 81
Score = 54.0 bits (27), Expect = 2e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtgataagtttgatggcacaagctcgattctatgggtctct 73
|||||||||||||||||||||| | | | || ||||||||||| |||||||||||| |
Sbjct: 13 aacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttctatgggtctgt 72
Query: 74 gtc 76
|||
Sbjct: 73 gtc 75
>28201_mne-mir-99a:mirbase
Length = 81
Score = 54.0 bits (27), Expect = 2e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtgataagtttgatggcacaagctcgattctatgggtctct 73
|||||||||||||||||||||| | | | || ||||||||||| |||||||||||| |
Sbjct: 13 aacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttctatgggtctgt 72
Query: 74 gtc 76
|||
Sbjct: 73 gtc 75
>28292_ggo-mir-99a:mirbase
Length = 81
Score = 54.0 bits (27), Expect = 2e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtgataagtttgatggcacaagctcgattctatgggtctct 73
|||||||||||||||||||||| | | | || ||||||||||| |||||||||||| |
Sbjct: 13 aacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttctatgggtctgt 72
Query: 74 gtc 76
|||
Sbjct: 73 gtc 75
>28412_hsa-mir-99a:mirbase
Length = 81
Score = 54.0 bits (27), Expect = 2e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtgataagtttgatggcacaagctcgattctatgggtctct 73
|||||||||||||||||||||| | | | || ||||||||||| |||||||||||| |
Sbjct: 13 aacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttctatgggtctgt 72
Query: 74 gtc 76
|||
Sbjct: 73 gtc 75
>30079_ppa-mir-99a:mirbase
Length = 81
Score = 54.0 bits (27), Expect = 2e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtgataagtttgatggcacaagctcgattctatgggtctct 73
|||||||||||||||||||||| | | | || ||||||||||| |||||||||||| |
Sbjct: 13 aacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttctatgggtctgt 72
Query: 74 gtc 76
|||
Sbjct: 73 gtc 75
>30196_ptr-mir-99a:mirbase
Length = 81
Score = 54.0 bits (27), Expect = 2e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtgataagtttgatggcacaagctcgattctatgggtctct 73
|||||||||||||||||||||| | | | || ||||||||||| |||||||||||| |
Sbjct: 13 aacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttctatgggtctgt 72
Query: 74 gtc 76
|||
Sbjct: 73 gtc 75
>33185_bta-mir-99a:mirbase
Length = 81
Score = 54.0 bits (27), Expect = 2e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtgataagtttgatggcacaagctcgattctatgggtctct 73
|||||||||||||||||||||| | | | || ||||||||||| |||||||||||| |
Sbjct: 13 aacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttctatgggtctgt 72
Query: 74 gtc 76
|||
Sbjct: 73 gtc 75
>33956_ssc-mir-99a:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 2e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtgataagtttgatggcacaagctcgattctatgggtctct 73
|||||||||||||||||||||| | | | || ||||||||||| |||||||||||| |
Sbjct: 12 aacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttctatgggtctgt 71
Query: 74 gtc 76
|||
Sbjct: 72 gtc 74
>32706_rno-mir-99a:mirbase
Length = 81
Score = 52.0 bits (26), Expect = 6e-08
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtgataagtttgatggcacaagctcgattctatgggtct 71
|||||||||||||||||||||| | | | || ||||||||||| ||||||||||||
Sbjct: 13 aacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgtttctatgggtct 70
>34262_dre-mir-99-2:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 3 cacttgtcattaacccgtagatccgatcttgtg 35
||||||||| ||||||||||||||||||||||
Sbjct: 1 cacttgtcacaaacccgtagatccgatcttgtg 33
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 51 caagctcgattctatgggtctctgtctctgtg 82
||||||||||||| |||||||||||| |||||
Sbjct: 49 caagctcgattctgtgggtctctgtcactgtg 80
>25754_xtr-mir-99:mirbase
Length = 71
Score = 46.1 bits (23), Expect = 4e-06
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtgataagtttgatggcacaagctcgattctatgggtctct 73
|||||||||||||||||||||| | | || | || |||||||| |||||||||||| |
Sbjct: 8 aacccgtagatccgatcttgtggtgaattcctttgctcaagctcgtttctatgggtctgt 67
Query: 74 gtc 76
|||
Sbjct: 68 gtc 70
>25929_gga-mir-99a:mirbase
Length = 81
Score = 46.1 bits (23), Expect = 4e-06
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtgataagtttgatggcacaagctcgattctatgggtctct 73
|||||||||||||||||||||| | | | | ||||||||||| |||||||||||| |
Sbjct: 13 aacccgtagatccgatcttgtgttgaaatgcactgcacaagctcgcttctatgggtctgt 72
Query: 74 gtc 76
|||
Sbjct: 73 gtc 75
>26995_eca-mir-99a-2:mirbase
Length = 81
Score = 46.1 bits (23), Expect = 4e-06
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtgataagtttgatggcacaagctcgattctatgggtctct 73
|||||||||||||||||||||| | | | || |||||||||| |||||||||||| |
Sbjct: 13 aacccgtagatccgatcttgtggtgaagtggacctcacaagctcgcttctatgggtctgt 72
Query: 74 gtc 76
|||
Sbjct: 73 gtc 75
>31470_oan-mir-99:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 gccacttgtcattaacccgtagatccgatcttgtg 35
|||| ||| ||| ||||||||||||||||||||||
Sbjct: 11 gccagttggcataaacccgtagatccgatcttgtg 45
>38866_lgi-mir-100:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtgataa 39
||||||||||||||| ||||||||||
Sbjct: 21 aacccgtagatccgaacttgtgataa 46
>26439_tgu-mir-99-2:mirbase
Length = 71
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtg 35
||||||||||||||||||||||
Sbjct: 11 aacccgtagatccgatcttgtg 32
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 48 gcacaagctcgattctatgggtct 71
||||||||||| ||||||||||||
Sbjct: 45 gcacaagctcgcttctatgggtct 68
>26438_tgu-mir-99-1:mirbase
Length = 71
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtg 35
||||||||||||||||||||||
Sbjct: 11 aacccgtagatccgatcttgtg 32
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 48 gcacaagctcgattctatgggtct 71
||||||||||| ||||||||||||
Sbjct: 45 gcacaagctcgcttctatgggtct 68
>26674_cfa-mir-99a-2:mirbase
Length = 57
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtg 35
||||||||||||||||||||||
Sbjct: 1 aacccgtagatccgatcttgtg 22
>31825_mmu-mir-99a:mirbase
Length = 65
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 aacccgtagatccgatcttgtg 35
||||||||||||||||||||||
Sbjct: 5 aacccgtagatccgatcttgtg 26
>34970_isc-mir-100:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 taacccgtagatccgatcttgtg 35
|||||||||||||||| ||||||
Sbjct: 20 taacccgtagatccgaacttgtg 42
>35366_ame-mir-100:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 taacccgtagatccgatcttgtg 35
|||||||||||||||| ||||||
Sbjct: 18 taacccgtagatccgaacttgtg 40
>37648_nvi-mir-100:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 taacccgtagatccgatcttgtg 35
|||||||||||||||| ||||||
Sbjct: 18 taacccgtagatccgaacttgtg 40
