miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31472_oan-mir-101-1:mirbase
Length = 81
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 1 ggctgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgt 60
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 ggctgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgt 60
Query: 61 gataactgaaggatggc 77
|||||||||||||||||
Sbjct: 61 gataactgaaggatggc 77
>31828_mmu-mir-101a:mirbase
Length = 83
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 1 ggctgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgt 60
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2 ggctgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgt 61
Query: 61 gataactgaaggatggc 77
|||||||||||||||||
Sbjct: 62 gataactgaaggatggc 78
>33189_bta-mir-101-1:mirbase
Length = 83
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 1 ggctgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgt 60
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2 ggctgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgt 61
Query: 61 gataactgaaggatggc 77
|||||||||||||||||
Sbjct: 62 gataactgaaggatggc 78
>33960_ssc-mir-101-2:mirbase
Length = 81
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 1 ggctgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgt 60
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 ggctgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgt 60
Query: 61 gataactgaaggatggc 77
|||||||||||||||||
Sbjct: 61 gataactgaaggatggc 77
>27564_lla-mir-101:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 4 tgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgat 63
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgat 60
Query: 64 aactgaaggatggc 77
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>27611_sla-mir-101:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 4 tgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgat 63
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgat 60
Query: 64 aactgaaggatggc 77
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>27705_mml-mir-101-1:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 4 tgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgat 63
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgat 60
Query: 64 aactgaaggatggc 77
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>28202_mne-mir-101:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 4 tgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgat 63
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgat 60
Query: 64 aactgaaggatggc 77
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>28294_ggo-mir-101:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 4 tgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgat 63
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgat 60
Query: 64 aactgaaggatggc 77
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>30081_ppa-mir-101:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 4 tgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgat 63
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgat 60
Query: 64 aactgaaggatggc 77
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>30199_ptr-mir-101-1:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 4 tgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgat 63
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgat 60
Query: 64 aactgaaggatggc 77
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>30805_ppy-mir-101-1:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 4 tgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgat 63
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgat 60
Query: 64 aactgaaggatggc 77
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>32709_rno-mir-101a:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 4 tgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgat 63
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgat 60
Query: 64 aactgaaggatggc 77
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>27502_age-mir-101:mirbase
Length = 75
Score = 115 bits (58), Expect = 5e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 4 tgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgat 63
|||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtctattctaaaggtacagtactgtgat 60
Query: 64 aactgaaggatggc 77
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>28415_hsa-mir-101-1:mirbase
Length = 75
Score = 115 bits (58), Expect = 5e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 4 tgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgat 63
|||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtctattctaaaggtacagtactgtgat 60
Query: 64 aactgaaggatggc 77
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>30804_ppy-mir-101:mirbase
Length = 75
Score = 115 bits (58), Expect = 5e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 4 tgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgat 63
|||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1 tgccctggctcagttatcacagtgctgatgctgtctattctaaaggtacagtactgtgat 60
Query: 64 aactgaaggatggc 77
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>27365_mdo-mir-101-1:mirbase
Length = 83
Score = 113 bits (57), Expect = 2e-26
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 1 ggctgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgt 60
||||||||||| ||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 2 ggctgccctggctcagttatcacagtgctgatgctgtccgttctcaaggtacagtactgt 61
Query: 61 gataactgaaggatggc 77
|||||||||||||||||
Sbjct: 62 gataactgaaggatggc 78
>25757_xtr-mir-101a-2:mirbase
Length = 83
Score = 111 bits (56), Expect = 8e-26
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 1 ggctgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgt 60
||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 2 ggctgccctggctcagttatcacagtgctgatgctgtctactctaaaggtacagtactgt 61
Query: 61 gataactgaaggatgg 76
||||||||||||||||
Sbjct: 62 gataactgaaggatgg 77
>25932_gga-mir-101-2:mirbase
Length = 76
Score = 111 bits (56), Expect = 8e-26
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 2 gctgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtg 61
|||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 1 gctgccctggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtg 60
Query: 62 ataactgaaggatggc 77
||||||||||||||||
Sbjct: 61 ataactgaaggatggc 76
>34580_fru-mir-101a:mirbase
Length = 74
Score = 107 bits (54), Expect = 1e-24
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 4 tgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgat 63
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 1 tgccctggttcagttatcacagtgctgatgctgtccccatcgaaggtacagtactgtgat 60
Query: 64 aactgaaggatggc 77
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>34727_tni-mir-101a:mirbase
Length = 74
Score = 107 bits (54), Expect = 1e-24
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 4 tgccctggttcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgat 63
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 1 tgccctggttcagttatcacagtgctgatgctgtccccatcgaaggtacagtactgtgat 60
Query: 64 aactgaaggatggc 77
||||||||||||||
Sbjct: 61 aactgaaggatggc 74
>26443_tgu-mir-101-2:mirbase
Length = 72
Score = 97.6 bits (49), Expect = 1e-21
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 13 tcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgataactgaagg 72
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 5 tcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactgaagg 64
Query: 73 atggc 77
|||||
Sbjct: 65 atggc 69
>26676_cfa-mir-101-1:mirbase
Length = 55
Score = 93.7 bits (47), Expect = 2e-20
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 15 agttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgataactga 69
||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 agttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactga 55
>26998_eca-mir-101:mirbase
Length = 59
Score = 83.8 bits (42), Expect = 2e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 13 tcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgataactgaa 70
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 2 tcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
>26999_eca-mir-101-2:mirbase
Length = 72
Score = 61.9 bits (31), Expect = 6e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 30 gatgctgtccatcttaaaggtacagtactgtgataactgaaggatgg 76
|||||||| |||| ||||||||||||||||||||||||||| ||||
Sbjct: 24 gatgctgtatatctgaaaggtacagtactgtgataactgaagaatgg 70
>27706_mml-mir-101-2:mirbase
Length = 79
Score = 61.9 bits (31), Expect = 6e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 30 gatgctgtccatcttaaaggtacagtactgtgataactgaaggatgg 76
|||||||| |||| ||||||||||||||||||||||||||| ||||
Sbjct: 29 gatgctgtatatctgaaaggtacagtactgtgataactgaagaatgg 75
>28416_hsa-mir-101-2:mirbase
Length = 79
Score = 61.9 bits (31), Expect = 6e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 30 gatgctgtccatcttaaaggtacagtactgtgataactgaaggatgg 76
|||||||| |||| ||||||||||||||||||||||||||| ||||
Sbjct: 29 gatgctgtatatctgaaaggtacagtactgtgataactgaagaatgg 75
>30200_ptr-mir-101-2:mirbase
Length = 78
Score = 61.9 bits (31), Expect = 6e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 30 gatgctgtccatcttaaaggtacagtactgtgataactgaaggatgg 76
|||||||| |||| ||||||||||||||||||||||||||| ||||
Sbjct: 28 gatgctgtatatctgaaaggtacagtactgtgataactgaagaatgg 74
>30806_ppy-mir-101-2:mirbase
Length = 79
Score = 61.9 bits (31), Expect = 6e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 30 gatgctgtccatcttaaaggtacagtactgtgataactgaaggatgg 76
|||||||| |||| ||||||||||||||||||||||||||| ||||
Sbjct: 29 gatgctgtatatctgaaaggtacagtactgtgataactgaagaatgg 75
>33188_bta-mir-101:mirbase
Length = 79
Score = 61.9 bits (31), Expect = 6e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 30 gatgctgtccatcttaaaggtacagtactgtgataactgaaggatgg 76
|||||||| |||| ||||||||||||||||||||||||||| ||||
Sbjct: 29 gatgctgtatatctgaaaggtacagtactgtgataactgaagaatgg 75
>33959_ssc-mir-101-1:mirbase
Length = 91
Score = 61.9 bits (31), Expect = 6e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 30 gatgctgtccatcttaaaggtacagtactgtgataactgaaggatgg 76
|||||||| |||| ||||||||||||||||||||||||||| ||||
Sbjct: 35 gatgctgtatatctgaaaggtacagtactgtgataactgaagaatgg 81
>31473_oan-mir-101-2:mirbase
Length = 79
Score = 58.0 bits (29), Expect = 1e-09
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 16 gttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgataactgaaggatg 75
|||||||| || | |||||||| || | ||||||||||||||||||||||||||| |||
Sbjct: 15 gttatcacggtaccgatgctgtatatgtgaaaggtacagtactgtgataactgaagaatg 74
Query: 76 g 76
|
Sbjct: 75 g 75
>25756_xtr-mir-101a-1:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 45 aaaggtacagtactgtgataactgaaggatgg 76
||||||||||||||||||||||||||| ||||
Sbjct: 50 aaaggtacagtactgtgataactgaagaatgg 81
>25931_gga-mir-101:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 45 aaaggtacagtactgtgataactgaaggatgg 76
||||||||||||||||||||||||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaagaatgg 75
>26442_tgu-mir-101-1:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 45 aaaggtacagtactgtgataactgaaggatgg 76
||||||||||||||||||||||||||| ||||
Sbjct: 37 aaaggtacagtactgtgataactgaagaatgg 68
>26677_cfa-mir-101-2:mirbase
Length = 55
Score = 56.0 bits (28), Expect = 4e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 30 gatgctgtccatcttaaaggtacagtactgtgataactga 69
|||||||| |||| |||||||||||||||||||||||||
Sbjct: 16 gatgctgtatatctgaaaggtacagtactgtgataactga 55
>27366_mdo-mir-101-2:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 45 aaaggtacagtactgtgataactgaaggatgg 76
||||||||||||||||||||||||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaagaatgg 75
>32710_rno-mir-101b:mirbase
Length = 97
Score = 54.0 bits (27), Expect = 2e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 30 gatgctgtccatcttaaaggtacagtactgtgataactgaaggatgg 76
|||||||| |||| |||||||||||||||||||| |||||| ||||
Sbjct: 41 gatgctgtagatctgaaaggtacagtactgtgatagctgaagaatgg 87
>31829_mmu-mir-101b:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 45 aaaggtacagtactgtgataactgaaggatggc 77
|||||||||||||||||||| |||||| |||||
Sbjct: 56 aaaggtacagtactgtgatagctgaagaatggc 88
>31830_mmu-mir-101c:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 acagtactgtgataactga 69
|||||||||||||||||||
Sbjct: 46 acagtactgtgataactga 64
>34266_dre-mir-101b:mirbase
Length = 112
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 gtacagtactgtgataactgaag 71
|||||||||| ||||||||||||
Sbjct: 63 gtacagtactatgataactgaag 85
>34581_fru-mir-101b:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 gtacagtactgtgataactgaag 71
|||||||||| ||||||||||||
Sbjct: 51 gtacagtactatgataactgaag 73
>34728_tni-mir-101b:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 gtacagtactgtgataactgaag 71
|||||||||| ||||||||||||
Sbjct: 51 gtacagtactatgataactgaag 73
