miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34281_dre-mir-125b-3:mirbase
Length = 115
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 4 ctcctcctgttccctgagaccctaactcgtgag 36
||||||||| ||||||||||||||||| |||||
Sbjct: 21 ctcctcctggtccctgagaccctaacttgtgag 53
>26453_tgu-mir-125-1:mirbase
Length = 72
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgaggtctttt 43
||||||||||||||||| ||||||| ||||
Sbjct: 11 tccctgagaccctaacttgtgaggtttttt 40
>26691_cfa-mir-125b-2:mirbase
Length = 61
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgaggtctttt 43
||||||||||||||||| ||||||| ||||
Sbjct: 1 tccctgagaccctaacttgtgaggtatttt 30
>27012_eca-mir-125b-2:mirbase
Length = 70
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgaggtctttt 43
||||||||||||||||| ||||||| ||||
Sbjct: 6 tccctgagaccctaacttgtgaggtatttt 35
>27508_age-mir-125b-2:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgaggtctttt 43
||||||||||||||||| ||||||| ||||
Sbjct: 17 tccctgagaccctaacttgtgaggtatttt 46
>27571_lla-mir-125b-2:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgaggtctttt 43
||||||||||||||||| ||||||| ||||
Sbjct: 17 tccctgagaccctaacttgtgaggtatttt 46
>27720_mml-mir-125b-2:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgaggtctttt 43
||||||||||||||||| ||||||| ||||
Sbjct: 17 tccctgagaccctaacttgtgaggtatttt 46
>28209_mne-mir-125b-2:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgaggtctttt 43
||||||||||||||||| ||||||| ||||
Sbjct: 17 tccctgagaccctaacttgtgaggtatttt 46
>28302_ggo-mir-125b-2:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgaggtctttt 43
||||||||||||||||| ||||||| ||||
Sbjct: 17 tccctgagaccctaacttgtgaggtatttt 46
>28433_hsa-mir-125b-2:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgaggtctttt 43
||||||||||||||||| ||||||| ||||
Sbjct: 17 tccctgagaccctaacttgtgaggtatttt 46
>30211_ptr-mir-125b-2:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgaggtctttt 43
||||||||||||||||| ||||||| ||||
Sbjct: 17 tccctgagaccctaacttgtgaggtatttt 46
>30820_ppy-mir-125b-2:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgaggtctttt 43
||||||||||||||||| ||||||| ||||
Sbjct: 17 tccctgagaccctaacttgtgaggtatttt 46
>31407_lca-mir-125b:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgaggtctttt 43
||||||||||||||||| ||||||| ||||
Sbjct: 17 tccctgagaccctaacttgtgaggtatttt 46
>31846_mmu-mir-125b-2:mirbase
Length = 71
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgaggtctttt 43
||||||||||||||||| ||||||| ||||
Sbjct: 7 tccctgagaccctaacttgtgaggtatttt 36
>31845_mmu-mir-125b-2:mirbase
Length = 71
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgaggtctttt 43
||||||||||||||||| ||||||| ||||
Sbjct: 7 tccctgagaccctaacttgtgaggtatttt 36
>32724_rno-mir-125b-2:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgaggtctttt 43
||||||||||||||||| ||||||| ||||
Sbjct: 17 tccctgagaccctaacttgtgaggtatttt 46
>33087_rno-mir-3588:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 14 tccctgagaccctaactcgtgaggtctttt 43
||||||||||||||||| ||||||| ||||
Sbjct: 81 tccctgagaccctaacttgtgaggtatttt 52
>33203_bta-mir-125b-2:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgaggtctttt 43
||||||||||||||||| ||||||| ||||
Sbjct: 13 tccctgagaccctaacttgtgaggtatttt 42
>33972_ssc-mir-125b-2:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgaggtctttt 43
||||||||||||||||| ||||||| ||||
Sbjct: 17 tccctgagaccctaacttgtgaggtatttt 46
>25943_gga-mir-125b:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgaggt 38
||||||||||||||||| |||||||
Sbjct: 17 tccctgagaccctaacttgtgaggt 41
>25766_xtr-mir-125b-2:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgagg 37
||||||||||||||||| ||||||
Sbjct: 13 tccctgagaccctaacttgtgagg 36
>27375_mdo-mir-125b-1:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgagg 37
||||||||||||||||| ||||||
Sbjct: 12 tccctgagaccctaacttgtgagg 35
>37610_nlo-mir-125:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 gttccctgagaccctaactcgtga 35
||||||||||||||||||| ||||
Sbjct: 16 gttccctgagaccctaacttgtga 39
>37650_nvi-mir-125:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 gttccctgagaccctaactcgtga 35
||||||||||||||||||| ||||
Sbjct: 25 gttccctgagaccctaacttgtga 48
>24674_bfl-mir-125a:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 21 ttccctgagaccctaacttgtga 43
>24675_bfl-mir-125b:mirbase
Length = 82
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 77 ttccctgagaccctaacttgtga 55
>25474_pma-mir-125:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgag 36
||||||||||||||||| |||||
Sbjct: 17 tccctgagaccctaacttgtgag 39
>34280_dre-mir-125b-2:mirbase
Length = 86
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 13 ttccctgagaccctaacttgtga 35
>34589_fru-mir-125b:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 7 ttccctgagaccctaacttgtga 29
>34736_tni-mir-125b:mirbase
Length = 95
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 13 ttccctgagaccctaacttgtga 35
>34879_sko-mir-125a:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 tccctgagaccctaactcgtgag 36
||||||||||||||||| |||||
Sbjct: 22 tccctgagaccctaacttgtgag 44
>35192_aae-mir-125:mirbase
Length = 95
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 20 ttccctgagaccctaacttgtga 42
>35290_aga-mir-125:mirbase
Length = 112
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 29 ttccctgagaccctaacttgtga 51
>36022_cqu-mir-125:mirbase
Length = 95
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 20 ttccctgagaccctaacttgtga 42
>36108_dan-mir-125:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 28 ttccctgagaccctaacttgtga 50
>36186_der-mir-125:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 28 ttccctgagaccctaacttgtga 50
>36274_dgr-mir-125-1:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 28 ttccctgagaccctaacttgtga 50
>36275_dgr-mir-125-2:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 28 ttccctgagaccctaacttgtga 50
>36387_dme-mir-125:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 28 ttccctgagaccctaacttgtga 50
>36388_dme-mir-125:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 28 ttccctgagaccctaacttgtga 50
>36784_dmo-mir-125:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 28 ttccctgagaccctaacttgtga 50
>36858_dpe-mir-125-1:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 28 ttccctgagaccctaacttgtga 50
>36859_dpe-mir-125-2:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 28 ttccctgagaccctaacttgtga 50
>36860_dpe-mir-125-3:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 28 ttccctgagaccctaacttgtga 50
>36934_dps-mir-125:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 28 ttccctgagaccctaacttgtga 50
>37146_dse-mir-125:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 28 ttccctgagaccctaacttgtga 50
>37221_dsi-mir-125:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 28 ttccctgagaccctaacttgtga 50
>37360_dvi-mir-125:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 28 ttccctgagaccctaacttgtga 50
>37439_dwi-mir-125:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 28 ttccctgagaccctaacttgtga 50
>37514_dya-mir-125:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 28 ttccctgagaccctaacttgtga 50
>37741_tca-mir-125:mirbase
Length = 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 10 ttccctgagaccctaacttgtga 32
>37742_tca-mir-125:mirbase
Length = 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 ttccctgagaccctaactcgtga 35
|||||||||||||||||| ||||
Sbjct: 10 ttccctgagaccctaacttgtga 32
