miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34590_fru-mir-126:mirbase
Length = 63
Score = 107 bits (54), Expect = 2e-24
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaata 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaata 59
>34737_tni-mir-126:mirbase
Length = 63
Score = 107 bits (54), Expect = 2e-24
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaata 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaata 59
>34283_dre-mir-126a:mirbase
Length = 101
Score = 81.8 bits (41), Expect = 9e-17
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaa-ctcgtaccgtgagtaatagtgca 81
|||||||||||||||||||||||| |||| ||||| |||||||||||||||||| ||||
Sbjct: 26 cattattacttttggtacgcgctaggccagactcaaactcgtaccgtgagtaataatgca 85
Query: 82 ctgtg 86
|||||
Sbjct: 86 ctgtg 90
>25944_gga-mir-126:mirbase
Length = 84
Score = 71.9 bits (36), Expect = 9e-14
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaatagtgcac 82
||||||||||||||||||||||| || |||| |||||||||||||||||||| ||| |
Sbjct: 14 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcgc 73
Query: 83 tgtg 86
||||
Sbjct: 74 tgtg 77
>26455_tgu-mir-126:mirbase
Length = 132
Score = 71.9 bits (36), Expect = 9e-14
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaatagtgcac 82
||||||||||||||||||||||| || |||| |||||||||||||||||||| ||| |
Sbjct: 64 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcgc 123
Query: 83 tgtg 86
||||
Sbjct: 124 tgtg 127
>27721_mml-mir-126:mirbase
Length = 85
Score = 69.9 bits (35), Expect = 3e-13
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaatagtgcac 82
||||||||||||||||||||||| || |||| |||||||||||||||||||| ||| |
Sbjct: 15 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcgc 74
Query: 83 tgt 85
|||
Sbjct: 75 tgt 77
>33204_bta-mir-126:mirbase
Length = 73
Score = 69.9 bits (35), Expect = 3e-13
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaatagtgcac 82
||||||||||||||||||||||| || |||| |||||||||||||||||||| ||| |
Sbjct: 9 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcgc 68
Query: 83 tgt 85
|||
Sbjct: 69 tgt 71
>33973_ssc-mir-126:mirbase
Length = 73
Score = 69.9 bits (35), Expect = 3e-13
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaatagtgcac 82
||||||||||||||||||||||| || |||| |||||||||||||||||||| ||| |
Sbjct: 9 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcgc 68
Query: 83 tgt 85
|||
Sbjct: 69 tgt 71
>26692_cfa-mir-126:mirbase
Length = 59
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaata 76
||||||||||||||||||||||| || |||| ||||||||||||||||||||
Sbjct: 1 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaata 54
>27013_eca-mir-126:mirbase
Length = 73
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaata 76
||||||||||||||||||||||| || |||| ||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaata 62
>27014_eca-mir-126:mirbase
Length = 73
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaata 76
||||||||||||||||||||||| || |||| ||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaata 62
>28434_hsa-mir-126:mirbase
Length = 85
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaata 76
||||||||||||||||||||||| || |||| ||||||||||||||||||||
Sbjct: 15 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaata 68
>30212_ptr-mir-126:mirbase
Length = 84
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaata 76
||||||||||||||||||||||| || |||| ||||||||||||||||||||
Sbjct: 14 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaata 67
>30821_ppy-mir-126:mirbase
Length = 81
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaata 76
||||||||||||||||||||||| || |||| ||||||||||||||||||||
Sbjct: 15 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaata 68
>31847_mmu-mir-126:mirbase
Length = 73
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaata 76
||||||||||||||||||||||| || |||| ||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaata 62
>31848_mmu-mir-126:mirbase
Length = 73
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaata 76
||||||||||||||||||||||| || |||| ||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaata 62
>32725_rno-mir-126:mirbase
Length = 73
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaata 76
||||||||||||||||||||||| || |||| ||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaata 62
>33060_rno-mir-3567:mirbase
Length = 118
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaata 76
||||||||||||||||||||||| || |||| ||||||||||||||||||||
Sbjct: 86 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaata 33
>27377_mdo-mir-126:mirbase
Length = 69
Score = 61.9 bits (31), Expect = 8e-11
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 22 tcattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaata 76
|||||||||||||||||||||||| || ||| ||||||||||||||||||||
Sbjct: 4 tcattattacttttggtacgcgctgtgacacatcaaactcgtaccgtgagtaata 58
>25767_xtr-mir-126:mirbase
Length = 69
Score = 60.0 bits (30), Expect = 3e-10
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaata 76
||||||||||||||||||||||| || ||| ||||||||||||||||||||
Sbjct: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaata 61
>31481_oan-mir-126:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaata 76
||||||||||||||||||||||| || | || ||||||||||||||||||||
Sbjct: 29 cattattacttttggtacgcgctgtgacgcttcaaactcgtaccgtgagtaata 82
