miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34596_fru-mir-132:mirbase
Length = 85
Score = 89.7 bits (45), Expect = 3e-19
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 1 gtctccatggcgaccgtggcattagattgttactgtaggaacagaatttttggtaacagt 60
|||||||||| |||||||||||||||||||||||||| ||| | | ||||||||||
Sbjct: 1 gtctccatggttaccgtggcattagattgttactgtagcaactgcaccagtggtaacagt 60
Query: 61 ctacagccatggtcgctagtgggca 85
||||||||||||||||||| |||||
Sbjct: 61 ctacagccatggtcgctagggggca 85
>34743_tni-mir-132:mirbase
Length = 85
Score = 81.8 bits (41), Expect = 7e-17
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 1 gtctccatggcgaccgtggcattagattgttactgtaggaacagaatttttggtaacagt 60
|||||||||| |||||||||||||||||||||||||| ||| | | |||||||||
Sbjct: 1 gtctccatggttaccgtggcattagattgttactgtagcaactgcaccagcggtaacagt 60
Query: 61 ctacagccatggtcgctagtgggca 85
||||||||||||||||||| |||||
Sbjct: 61 ctacagccatggtcgctagggggca 85
>25775_xtr-mir-132:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 50 ttggtaacagtctacagccatggtcgct 77
||||||||||||||||||||||||||||
Sbjct: 48 ttggtaacagtctacagccatggtcgct 75
>27730_mml-mir-132:mirbase
Length = 101
Score = 56.0 bits (28), Expect = 4e-09
Identities = 64/76 (84%), Gaps = 5/76 (6%)
Strand = Plus / Plus
Query: 1 gtctccatggcgaccgtggcattagattgttactgtaggaacagaatttttggtaacagt 60
||||||| ||| |||||||| || |||||||||||| ||||| | | |||||||||
Sbjct: 11 gtctccagggcaaccgtggctttcgattgttactgtgggaactgga-----ggtaacagt 65
Query: 61 ctacagccatggtcgc 76
||||||||||||||||
Sbjct: 66 ctacagccatggtcgc 81
>28444_hsa-mir-132:mirbase
Length = 101
Score = 56.0 bits (28), Expect = 4e-09
Identities = 64/76 (84%), Gaps = 5/76 (6%)
Strand = Plus / Plus
Query: 1 gtctccatggcgaccgtggcattagattgttactgtaggaacagaatttttggtaacagt 60
||||||| ||| |||||||| || |||||||||||| ||||| | | |||||||||
Sbjct: 11 gtctccagggcaaccgtggctttcgattgttactgtgggaactgga-----ggtaacagt 65
Query: 61 ctacagccatggtcgc 76
||||||||||||||||
Sbjct: 66 ctacagccatggtcgc 81
>30829_ppy-mir-132:mirbase
Length = 101
Score = 56.0 bits (28), Expect = 4e-09
Identities = 64/76 (84%), Gaps = 5/76 (6%)
Strand = Plus / Plus
Query: 1 gtctccatggcgaccgtggcattagattgttactgtaggaacagaatttttggtaacagt 60
||||||| ||| |||||||| || |||||||||||| ||||| | | |||||||||
Sbjct: 11 gtctccagggcaaccgtggctttcgattgttactgtgggaactgga-----ggtaacagt 65
Query: 61 ctacagccatggtcgc 76
||||||||||||||||
Sbjct: 66 ctacagccatggtcgc 81
>32733_rno-mir-132:mirbase
Length = 101
Score = 56.0 bits (28), Expect = 4e-09
Identities = 64/76 (84%), Gaps = 5/76 (6%)
Strand = Plus / Plus
Query: 1 gtctccatggcgaccgtggcattagattgttactgtaggaacagaatttttggtaacagt 60
||||||| ||| |||||||| || |||||||||||| ||||| | | |||||||||
Sbjct: 11 gtctccagggcaaccgtggctttcgattgttactgtgggaaccgga-----ggtaacagt 65
Query: 61 ctacagccatggtcgc 76
||||||||||||||||
Sbjct: 66 ctacagccatggtcgc 81
>33213_bta-mir-132:mirbase
Length = 101
Score = 56.0 bits (28), Expect = 4e-09
Identities = 64/76 (84%), Gaps = 5/76 (6%)
Strand = Plus / Plus
Query: 1 gtctccatggcgaccgtggcattagattgttactgtaggaacagaatttttggtaacagt 60
||||||| ||| |||||||| || |||||||||||| ||||| | | |||||||||
Sbjct: 11 gtctccagggcaaccgtggctttcgattgttactgtgggaaccgga-----ggtaacagt 65
Query: 61 ctacagccatggtcgc 76
||||||||||||||||
Sbjct: 66 ctacagccatggtcgc 81
>34295_dre-mir-132-2:mirbase
Length = 119
Score = 52.0 bits (26), Expect = 6e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1 gtctccatggcgaccgtggcattagattgttactgtag 38
||||||||| ||||||||| |||||||||||||||||
Sbjct: 15 gtctccatgctgaccgtggctttagattgttactgtag 52
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 tggtaacagtctacagccatggtcgc 76
||||||||||||||||||||||||||
Sbjct: 63 tggtaacagtctacagccatggtcgc 88
>26700_cfa-mir-132:mirbase
Length = 60
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 ggtaacagtctacagccatggtcgc 76
|||||||||||||||||||||||||
Sbjct: 36 ggtaacagtctacagccatggtcgc 60
>27024_eca-mir-132:mirbase
Length = 66
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 ggtaacagtctacagccatggtcgc 76
|||||||||||||||||||||||||
Sbjct: 40 ggtaacagtctacagccatggtcgc 64
>27381_mdo-mir-132:mirbase
Length = 66
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 ggtaacagtctacagccatggtcgc 76
|||||||||||||||||||||||||
Sbjct: 40 ggtaacagtctacagccatggtcgc 64
>31858_mmu-mir-132:mirbase
Length = 66
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 ggtaacagtctacagccatggtcgc 76
|||||||||||||||||||||||||
Sbjct: 40 ggtaacagtctacagccatggtcgc 64
>25484_pma-mir-132:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 gtaacagtctacagccatgg 72
||||||||||||||||||||
Sbjct: 59 gtaacagtctacagccatgg 78
