miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27383_mdo-mir-135a:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 10 gtgtcttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
||||||||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 17 gtgtcttatggctttttattcctatgtgatagtaataaagtctcatgtagggat 70
>25780_xtr-mir-135-1:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 ctgtcgtgtcttatggctttttattcctatgtga 38
|||| |||| ||||||||||||||||||||||||
Sbjct: 12 ctgtggtgttttatggctttttattcctatgtga 45
>25955_gga-mir-135a-2:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 8e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 10 gtgtcttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
|||| |||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 17 gtgttttatggctttttattcctatgtgatagtaataaagtctcatgtagggat 70
>26465_tgu-mir-135a-1:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 8e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 10 gtgtcttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
|||| |||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 5 gtgttttatggctttttattcctatgtgatagtaataaagtctcatgtagggat 58
>31491_oan-mir-135a:mirbase
Length = 109
Score = 52.0 bits (26), Expect = 8e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 10 gtgtcttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
|||| |||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 23 gtgttttatggctttttattcctatgtgatagtaataaagtctcatgtagggat 76
>26706_cfa-mir-135a-2:mirbase
Length = 62
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 15 ttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
|||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 1 ttatggctttttattcctatgtgatagtaataaagtctcatgtagggat 49
>26707_cfa-mir-135a-2:mirbase
Length = 62
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 15 ttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
|||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 1 ttatggctttttattcctatgtgatagtaataaagtctcatgtagggat 49
>27030_eca-mir-135a-2:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 15 ttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
|||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 22 ttatggctttttattcctatgtgatagtaataaagtctcatgtagggat 70
>27513_age-mir-135-2:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 15 ttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
|||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 22 ttatggctttttattcctatgtgatagtaataaagtctcatgtagggat 70
>27575_lla-mir-135-2:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 15 ttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
|||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 22 ttatggctttttattcctatgtgatagtaataaagtctcatgtagggat 70
>27736_mml-mir-135a-2:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 15 ttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
|||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 22 ttatggctttttattcctatgtgatagtaataaagtctcatgtagggat 70
>28306_ggo-mir-135:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 15 ttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
|||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 22 ttatggctttttattcctatgtgatagtaataaagtctcatgtagggat 70
>28450_hsa-mir-135a-2:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 15 ttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
|||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 22 ttatggctttttattcctatgtgatagtaataaagtctcatgtagggat 70
>30094_ppa-mir-135-2:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 15 ttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
|||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 22 ttatggctttttattcctatgtgatagtaataaagtctcatgtagggat 70
>30225_ptr-mir-135a-2:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 15 ttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
|||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 22 ttatggctttttattcctatgtgatagtaataaagtctcatgtagggat 70
>30834_ppy-mir-135:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 15 ttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
|||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 22 ttatggctttttattcctatgtgatagtaataaagtctcatgtagggat 70
>31864_mmu-mir-135a-2:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 15 ttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
|||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 22 ttatggctttttattcctatgtgatcgtaataaagtctcatgtagggat 70
>32737_rno-mir-135a:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 15 ttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
|||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 22 ttatggctttttattcctatgtgatcgtaataaagtctcatgtagggat 70
>33219_bta-mir-135a-2:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 15 ttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
|||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 22 ttatggctttttattcctatgtgatagtaataaagtctcatgtagggat 70
>33987_ssc-mir-135-2:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 15 ttatggctttttattcctatgtgaaggtgaacaaggctcatgtagggat 63
|||||||||||||||||||||||| || | ||| |||||||||||||
Sbjct: 22 ttatggctttttattcctatgtgatagtaataaagtctcatgtagggat 70
>25487_pma-mir-135a:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 ttatggctttttattcctatgtga 38
||||||||||||||||||||||||
Sbjct: 14 ttatggctttttattcctatgtga 37
>26466_tgu-mir-135a-2:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 ttatggctttttattcctatgtga 38
||||||||||||||||||||||||
Sbjct: 14 ttatggctttttattcctatgtga 37
>25781_xtr-mir-135-2:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tatggctttttattcctatgtga 38
|||||||||||||||||||||||
Sbjct: 16 tatggctttttattcctatgtga 38
>25954_gga-mir-135a-1:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tatggctttttattcctatgtga 38
|||||||||||||||||||||||
Sbjct: 15 tatggctttttattcctatgtga 37
>25956_gga-mir-135a-3:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tatggctttttattcctatgtga 38
|||||||||||||||||||||||
Sbjct: 16 tatggctttttattcctatgtga 38
>26467_tgu-mir-135b:mirbase
Length = 73
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tatggctttttattcctatgtga 38
|||||||||||||||||||||||
Sbjct: 11 tatggctttttattcctatgtga 33
>26705_cfa-mir-135a-1:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tatggctttttattcctatgtga 38
|||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtga 39
>27029_eca-mir-135a:mirbase
Length = 60
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tatggctttttattcctatgtga 38
|||||||||||||||||||||||
Sbjct: 2 tatggctttttattcctatgtga 24
>27512_age-mir-135-1:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tatggctttttattcctatgtga 38
|||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtga 39
>27574_lla-mir-135-1:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tatggctttttattcctatgtga 38
|||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtga 39
>27735_mml-mir-135a-1:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tatggctttttattcctatgtga 38
|||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtga 39
>28449_hsa-mir-135a-1:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tatggctttttattcctatgtga 38
|||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtga 39
>30093_ppa-mir-135-1:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tatggctttttattcctatgtga 38
|||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtga 39
>30224_ptr-mir-135a-1:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tatggctttttattcctatgtga 38
|||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtga 39
>30835_ppy-mir-135a-1:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tatggctttttattcctatgtga 38
|||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtga 39
>31492_oan-mir-135b:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tatggctttttattcctatgtga 38
|||||||||||||||||||||||
Sbjct: 31 tatggctttttattcctatgtga 53
>31863_mmu-mir-135a-1:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tatggctttttattcctatgtga 38
|||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtga 39
>33218_bta-mir-135a-1:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tatggctttttattcctatgtga 38
|||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtga 39
>33986_ssc-mir-135-1:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tatggctttttattcctatgtga 38
|||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtga 39
>34302_dre-mir-135c-1:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 10 gtgtcttatggctttttattcctatgtga 38
|||| |||||||||| |||||||||||||
Sbjct: 5 gtgttttatggctttctattcctatgtga 33
>34303_dre-mir-135c-2:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 10 gtgtcttatggctttttattcctatgtga 38
|||| |||||||||| |||||||||||||
Sbjct: 5 gtgttttatggctttctattcctatgtga 33
>34598_fru-mir-135a:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 10 gtgtcttatggctttttattcctatgtga 38
|||| |||||||||| |||||||||||||
Sbjct: 5 gtgttttatggctttctattcctatgtga 33
>34745_tni-mir-135a:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 10 gtgtcttatggctttttattcctatgtga 38
|||| |||||||||| |||||||||||||
Sbjct: 5 gtgttttatggctttctattcctatgtga 33
>34304_dre-mir-135c-3:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ttatggctttttattcctatgtga 38
|||||||||| |||||||||||||
Sbjct: 35 ttatggctttctattcctatgtga 58
