miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34599_fru-mir-135b:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 gtatggctttttattcctatctga 35
||||||||||||||||||||||||
Sbjct: 15 gtatggctttttattcctatctga 38
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tcatatagggatggaagccatgca 73
||||||||||||||||||||||||
Sbjct: 52 tcatatagggatggaagccatgca 75
>34746_tni-mir-135b:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 gtatggctttttattcctatctga 35
||||||||||||||||||||||||
Sbjct: 13 gtatggctttttattcctatctga 36
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tcatatagggatggaagccatgca 73
||||||||||||||||||||||||
Sbjct: 50 tcatatagggatggaagccatgca 73
>27575_lla-mir-135-2:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatgca 73
||||| |||||||||||||||||||
Sbjct: 58 ctcatgtagggatggaagccatgca 82
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 23 tatggctttttattcctat 41
>25954_gga-mir-135a-1:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 gtatggctttttattcctat 31
||||||||||||||||||||
Sbjct: 14 gtatggctttttattcctat 33
>26467_tgu-mir-135b:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 gtatggctttttattcctat 31
||||||||||||||||||||
Sbjct: 10 gtatggctttttattcctat 29
>25487_pma-mir-135a:mirbase
Length = 86
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 15 tatggctttttattcctat 33
>25488_pma-mir-135b:mirbase
Length = 87
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 12 gtatggctttttattccta 30
|||||||||||||||||||
Sbjct: 11 gtatggctttttattccta 29
>25780_xtr-mir-135-1:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 23 tatggctttttattcctat 41
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 58 ctcatgtagggatggaagccatg 80
>25781_xtr-mir-135-2:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 16 tatggctttttattcctat 34
>25955_gga-mir-135a-2:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 23 tatggctttttattcctat 41
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 58 ctcatgtagggatggaagccatg 80
>25956_gga-mir-135a-3:mirbase
Length = 96
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 16 tatggctttttattcctat 34
>26465_tgu-mir-135a-1:mirbase
Length = 73
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 11 tatggctttttattcctat 29
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 46 ctcatgtagggatggaagccatg 68
>26466_tgu-mir-135a-2:mirbase
Length = 86
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 15 tatggctttttattcctat 33
>26705_cfa-mir-135a-1:mirbase
Length = 87
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 17 tatggctttttattcctat 35
>26706_cfa-mir-135a-2:mirbase
Length = 62
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 2 tatggctttttattcctat 20
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 37 ctcatgtagggatggaagccatg 59
>26707_cfa-mir-135a-2:mirbase
Length = 62
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 2 tatggctttttattcctat 20
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 37 ctcatgtagggatggaagccatg 59
>27029_eca-mir-135a:mirbase
Length = 60
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 2 tatggctttttattcctat 20
>27030_eca-mir-135a-2:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 23 tatggctttttattcctat 41
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 58 ctcatgtagggatggaagccatg 80
>27383_mdo-mir-135a:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 23 tatggctttttattcctat 41
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 58 ctcatgtagggatggaagccatg 80
>27512_age-mir-135-1:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 17 tatggctttttattcctat 35
>27513_age-mir-135-2:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 23 tatggctttttattcctat 41
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 58 ctcatgtagggatggaagccatg 80
>27574_lla-mir-135-1:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 17 tatggctttttattcctat 35
>27735_mml-mir-135a-1:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 17 tatggctttttattcctat 35
>27736_mml-mir-135a-2:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 23 tatggctttttattcctat 41
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 58 ctcatgtagggatggaagccatg 80
>28306_ggo-mir-135:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 23 tatggctttttattcctat 41
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 58 ctcatgtagggatggaagccatg 80
>28449_hsa-mir-135a-1:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 17 tatggctttttattcctat 35
>28450_hsa-mir-135a-2:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 23 tatggctttttattcctat 41
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 58 ctcatgtagggatggaagccatg 80
>30093_ppa-mir-135-1:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 17 tatggctttttattcctat 35
>30094_ppa-mir-135-2:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 23 tatggctttttattcctat 41
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 58 ctcatgtagggatggaagccatg 80
>30224_ptr-mir-135a-1:mirbase
Length = 89
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 17 tatggctttttattcctat 35
>30225_ptr-mir-135a-2:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 23 tatggctttttattcctat 41
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 58 ctcatgtagggatggaagccatg 80
>30834_ppy-mir-135:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 23 tatggctttttattcctat 41
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 58 ctcatgtagggatggaagccatg 80
>30835_ppy-mir-135a-1:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 17 tatggctttttattcctat 35
>31491_oan-mir-135a:mirbase
Length = 109
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 29 tatggctttttattcctat 47
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 64 ctcatgtagggatggaagccatg 86
>31492_oan-mir-135b:mirbase
Length = 114
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 31 tatggctttttattcctat 49
>31863_mmu-mir-135a-1:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 17 tatggctttttattcctat 35
>31864_mmu-mir-135a-2:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 23 tatggctttttattcctat 41
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 58 ctcatgtagggatggaagccatg 80
>32737_rno-mir-135a:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 23 tatggctttttattcctat 41
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 58 ctcatgtagggatggaagccatg 80
>33218_bta-mir-135a-1:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 17 tatggctttttattcctat 35
>33219_bta-mir-135a-2:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 23 tatggctttttattcctat 41
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 58 ctcatgtagggatggaagccatg 80
>33986_ssc-mir-135-1:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 17 tatggctttttattcctat 35
>33987_ssc-mir-135-2:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 23 tatggctttttattcctat 41
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 ctcatatagggatggaagccatg 71
||||| |||||||||||||||||
Sbjct: 58 ctcatgtagggatggaagccatg 80
>34300_dre-mir-135a:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 13 tatggctttttattcctat 31
|||||||||||||||||||
Sbjct: 16 tatggctttttattcctat 34
