miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34302_dre-mir-135c-1:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tgctgtgttttatggctttctattcctatgtgattttcttctgccgtgtcacatagggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgctgtgttttatggctttctattcctatgtgattttcttctgccgtgtcacatagggtt 60
Query: 61 caaagccattgggtacagag 80
||||||||||||||||||||
Sbjct: 61 caaagccattgggtacagag 80
>34598_fru-mir-135a:mirbase
Length = 79
Score = 103 bits (52), Expect = 2e-23
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 tgctgtgttttatggctttctattcctatgtgattttcttctgccgtgtcacatagggtt 60
|||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||
Sbjct: 1 tgctgtgttttatggctttctattcctatgtgattttc-tctagcatgtcacatagggtc 59
Query: 61 caaagccattgggtacagag 80
|||||||||||||||||||
Sbjct: 60 taaagccattgggtacagag 79
>34745_tni-mir-135a:mirbase
Length = 79
Score = 103 bits (52), Expect = 2e-23
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 tgctgtgttttatggctttctattcctatgtgattttcttctgccgtgtcacatagggtt 60
|||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||
Sbjct: 1 tgctgtgttttatggctttctattcctatgtgattttc-tctagcatgtcacatagggtc 59
Query: 61 caaagccattgggtacagag 80
|||||||||||||||||||
Sbjct: 60 taaagccattgggtacagag 79
>34304_dre-mir-135c-3:mirbase
Length = 127
Score = 75.8 bits (38), Expect = 4e-15
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 3 ctgtgttttatggctttctattcctatgtgattttcttctgccgtgtcacatagggttca 62
||||| ||||||||||||||||||||||||||||| | || || ||| |||||||||
Sbjct: 28 ctgtgctttatggctttctattcctatgtgattttgatatgatgtatcatgtagggttca 87
Query: 63 aagccattgggtacagag 80
|||||||| |||||||||
Sbjct: 88 aagccattaggtacagag 105
>26466_tgu-mir-135a-2:mirbase
Length = 86
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 tgctgtgttttatggctttctattcctatgtgatt 35
||||||| ||||||||||| |||||||||||||||
Sbjct: 5 tgctgtggtttatggctttttattcctatgtgatt 39
>25780_xtr-mir-135-1:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 5 gtgttttatggctttctattcctatgtgat 34
||||||||||||||| ||||||||||||||
Sbjct: 17 gtgttttatggctttttattcctatgtgat 46
>25955_gga-mir-135a-2:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 5 gtgttttatggctttctattcctatgtgat 34
||||||||||||||| ||||||||||||||
Sbjct: 17 gtgttttatggctttttattcctatgtgat 46
>26465_tgu-mir-135a-1:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 5 gtgttttatggctttctattcctatgtgat 34
||||||||||||||| ||||||||||||||
Sbjct: 5 gtgttttatggctttttattcctatgtgat 34
>31491_oan-mir-135a:mirbase
Length = 109
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 5 gtgttttatggctttctattcctatgtgat 34
||||||||||||||| ||||||||||||||
Sbjct: 23 gtgttttatggctttttattcctatgtgat 52
>25487_pma-mir-135a:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 3 ctgtgttttatggctttctattcctatgtgatt 35
||||| ||||||||||| |||||||||||||||
Sbjct: 7 ctgtgctttatggctttttattcctatgtgatt 39
>25956_gga-mir-135a-3:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 tgctgtgttttatggctttctattcctatgtgatt 35
||||||| | ||||||||| |||||||||||||||
Sbjct: 6 tgctgtggtctatggctttttattcctatgtgatt 40
>26705_cfa-mir-135a-1:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 tatggctttctattcctatgtgatttt 37
||||||||| |||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatttt 43
>27030_eca-mir-135a-2:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 tttatggctttctattcctatgtgat 34
||||||||||| ||||||||||||||
Sbjct: 21 tttatggctttttattcctatgtgat 46
>27383_mdo-mir-135a:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 5 gtgttttatggctttctattcctatgtgat 34
|||| |||||||||| ||||||||||||||
Sbjct: 17 gtgtcttatggctttttattcctatgtgat 46
>27513_age-mir-135-2:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 tttatggctttctattcctatgtgat 34
||||||||||| ||||||||||||||
Sbjct: 21 tttatggctttttattcctatgtgat 46
>27575_lla-mir-135-2:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 tttatggctttctattcctatgtgat 34
||||||||||| ||||||||||||||
Sbjct: 21 tttatggctttttattcctatgtgat 46
>27736_mml-mir-135a-2:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 tttatggctttctattcctatgtgat 34
||||||||||| ||||||||||||||
Sbjct: 21 tttatggctttttattcctatgtgat 46
>28306_ggo-mir-135:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 tttatggctttctattcctatgtgat 34
||||||||||| ||||||||||||||
Sbjct: 21 tttatggctttttattcctatgtgat 46
>28450_hsa-mir-135a-2:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 tttatggctttctattcctatgtgat 34
||||||||||| ||||||||||||||
Sbjct: 21 tttatggctttttattcctatgtgat 46
>30094_ppa-mir-135-2:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 tttatggctttctattcctatgtgat 34
||||||||||| ||||||||||||||
Sbjct: 21 tttatggctttttattcctatgtgat 46
>30225_ptr-mir-135a-2:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 tttatggctttctattcctatgtgat 34
||||||||||| ||||||||||||||
Sbjct: 21 tttatggctttttattcctatgtgat 46
>30834_ppy-mir-135:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 tttatggctttctattcctatgtgat 34
||||||||||| ||||||||||||||
Sbjct: 21 tttatggctttttattcctatgtgat 46
>31864_mmu-mir-135a-2:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 tttatggctttctattcctatgtgat 34
||||||||||| ||||||||||||||
Sbjct: 21 tttatggctttttattcctatgtgat 46
>32737_rno-mir-135a:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 tttatggctttctattcctatgtgat 34
||||||||||| ||||||||||||||
Sbjct: 21 tttatggctttttattcctatgtgat 46
>33219_bta-mir-135a-2:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 tttatggctttctattcctatgtgat 34
||||||||||| ||||||||||||||
Sbjct: 21 tttatggctttttattcctatgtgat 46
>33987_ssc-mir-135-2:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 tttatggctttctattcctatgtgat 34
||||||||||| ||||||||||||||
Sbjct: 21 tttatggctttttattcctatgtgat 46
>25781_xtr-mir-135-2:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttctattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 16 tatggctttttattcctatgtgatt 40
>25954_gga-mir-135a-1:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttctattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 15 tatggctttttattcctatgtgatt 39
>26467_tgu-mir-135b:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttctattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 11 tatggctttttattcctatgtgatt 35
>26706_cfa-mir-135a-2:mirbase
Length = 62
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 ttatggctttctattcctatgtgat 34
|||||||||| ||||||||||||||
Sbjct: 1 ttatggctttttattcctatgtgat 25
>26707_cfa-mir-135a-2:mirbase
Length = 62
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 ttatggctttctattcctatgtgat 34
|||||||||| ||||||||||||||
Sbjct: 1 ttatggctttttattcctatgtgat 25
>27029_eca-mir-135a:mirbase
Length = 60
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttctattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 2 tatggctttttattcctatgtgatt 26
>27512_age-mir-135-1:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttctattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>27574_lla-mir-135-1:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttctattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>27735_mml-mir-135a-1:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttctattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>28449_hsa-mir-135a-1:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttctattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>30093_ppa-mir-135-1:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttctattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>30224_ptr-mir-135a-1:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttctattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>30835_ppy-mir-135a-1:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttctattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>31492_oan-mir-135b:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttctattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 31 tatggctttttattcctatgtgatt 55
>31863_mmu-mir-135a-1:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttctattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>33218_bta-mir-135a-1:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttctattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>33986_ssc-mir-135-1:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttctattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>34300_dre-mir-135a:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 5 gtgttttatggctttctattcctatgtga 33
|||| |||||||||| |||||||||||||
Sbjct: 10 gtgtcttatggctttttattcctatgtga 38
