miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34320_dre-mir-146b-2:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 gctcttggctttgagaactgaattccaagggtgtctgctttatattcagcccacggagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctcttggctttgagaactgaattccaagggtgtctgctttatattcagcccacggagtt 60
Query: 61 cagttcttaagtttggatgc 80
||||||||||||||||||||
Sbjct: 61 cagttcttaagtttggatgc 80
>25966_gga-mir-146b:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 cttggctttgagaactgaattcca 27
||||||||||||||||||||||||
Sbjct: 11 cttggctttgagaactgaattcca 34
>25795_xtr-mir-146:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 3 tcttggctttgagaactgaattcca 27
|||| ||||||||||||||||||||
Sbjct: 9 tcttagctttgagaactgaattcca 33
>25965_gga-mir-146a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gctttgagaactgaattccaagggt 32
|||||||||||||||||||| ||||
Sbjct: 12 gctttgagaactgaattccatgggt 36
>26477_tgu-mir-146c:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gctttgagaactgaattccaagggt 32
|||||||||||||||||||| ||||
Sbjct: 7 gctttgagaactgaattccatgggt 31
>27046_eca-mir-146a:mirbase
Length = 65
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gctttgagaactgaattccaagggt 32
|||||||||||||||||||| ||||
Sbjct: 2 gctttgagaactgaattccatgggt 26
>27394_mdo-mir-146a:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gctttgagaactgaattccaagggt 32
|||||||||||||||||||| ||||
Sbjct: 11 gctttgagaactgaattccatgggt 35
>27751_mml-mir-146a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gctttgagaactgaattccaagggt 32
|||||||||||||||||||| ||||
Sbjct: 17 gctttgagaactgaattccatgggt 41
>28466_hsa-mir-146a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gctttgagaactgaattccaagggt 32
|||||||||||||||||||| ||||
Sbjct: 17 gctttgagaactgaattccatgggt 41
>30238_ptr-mir-146a:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gctttgagaactgaattccaagggt 32
|||||||||||||||||||| ||||
Sbjct: 16 gctttgagaactgaattccatgggt 40
>30850_ppy-mir-146a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gctttgagaactgaattccaagggt 32
|||||||||||||||||||| ||||
Sbjct: 17 gctttgagaactgaattccatgggt 41
>31503_oan-mir-146a:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gctttgagaactgaattccaagggt 32
|||||||||||||||||||| ||||
Sbjct: 27 gctttgagaactgaattccacgggt 51
>33996_ssc-mir-146a:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gctttgagaactgaattccaagggt 32
|||||||||||||||||||| ||||
Sbjct: 7 gctttgagaactgaattccatgggt 31
>26476_tgu-mir-146b:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 4 cttggctttgagaactgaattcca 27
||||||| ||||||||||||||||
Sbjct: 3 cttggctctgagaactgaattcca 26
>31504_oan-mir-146b:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 4 cttggctttgagaactgaattcca 27
||||||| ||||||||||||||||
Sbjct: 17 cttggctctgagaactgaattcca 40
>33232_bta-mir-146a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 8 gctttgagaactgaattcca 27
||||||||||||||||||||
Sbjct: 17 gctttgagaactgaattcca 36
