miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25977_gga-mir-181b-2:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtttt 37
|||||||||||||||||||||||||
Sbjct: 17 acattcattgctgtcggtgggtttt 41
>26486_tgu-mir-181b-2:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtttt 37
|||||||||||||||||||||||||
Sbjct: 12 acattcattgctgtcggtgggtttt 36
>25976_gga-mir-181b-1:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 16 acattcattgctgtcggtgggttt 39
>26485_tgu-mir-181b-1:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 12 acattcattgctgtcggtgggttt 35
>26734_cfa-mir-181b-2:mirbase
Length = 60
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 2 acattcattgctgtcggtgggttt 25
>27062_eca-mir-181b:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 17 acattcattgctgtcggtgggttt 40
>27404_mdo-mir-181b:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 14 acattcattgctgtcggtgggttt 37
>27770_mml-mir-181b-2:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 17 acattcattgctgtcggtgggttt 40
>28486_hsa-mir-181b-2:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 17 acattcattgctgtcggtgggttt 40
>30254_ptr-mir-181b-2:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 16 acattcattgctgtcggtgggttt 39
>30868_ppy-mir-181b-2:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 17 acattcattgctgtcggtgggttt 40
>31511_oan-mir-181b:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 28 acattcattgctgtcggtgggttt 51
>31895_mmu-mir-181b-2:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 17 acattcattgctgtcggtgggttt 40
>32765_rno-mir-181b-2:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 16 acattcattgctgtcggtgggttt 39
>33247_bta-mir-181b-2:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 17 acattcattgctgtcggtgggttt 40
>34009_ssc-mir-181b-2:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 14 acattcattgctgtcggtgggttt 37
>34330_dre-mir-181b-1:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 38 acattcattgctgtcggtgggttt 61
>34331_dre-mir-181b-2:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 17 acattcattgctgtcggtgggttt 40
>34612_fru-mir-181b-1:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 15 acattcattgctgtcggtgggttt 38
>34613_fru-mir-181b-2:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 12 acattcattgctgtcggtgggttt 35
>34759_tni-mir-181b-1:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 15 acattcattgctgtcggtgggttt 38
>34760_tni-mir-181b-2:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggttt 36
||||||||||||||||||||||||
Sbjct: 12 acattcattgctgtcggtgggttt 35
>25805_xtr-mir-181b-1:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||||||||||||||||
Sbjct: 14 acattcattgctgtcggtgggtt 36
>25806_xtr-mir-181b-2:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||||||||||||||||
Sbjct: 15 acattcattgctgtcggtgggtt 37
>26733_cfa-mir-181b-1:mirbase
Length = 62
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||||||||||||||||
Sbjct: 2 acattcattgctgtcggtgggtt 24
>27579_lla-mir-181b:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||||||||||||||||
Sbjct: 37 acattcattgctgtcggtgggtt 59
>27769_mml-mir-181b-1:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||||||||||||||||
Sbjct: 37 acattcattgctgtcggtgggtt 59
>28223_mne-mir-181b:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||||||||||||||||
Sbjct: 37 acattcattgctgtcggtgggtt 59
>28315_ggo-mir-181b:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||||||||||||||||
Sbjct: 37 acattcattgctgtcggtgggtt 59
>28485_hsa-mir-181b-1:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||||||||||||||||
Sbjct: 37 acattcattgctgtcggtgggtt 59
>30104_ppa-mir-181b:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||||||||||||||||
Sbjct: 37 acattcattgctgtcggtgggtt 59
>30253_ptr-mir-181b-1:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||||||||||||||||
Sbjct: 37 acattcattgctgtcggtgggtt 59
>30867_ppy-mir-181b:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||||||||||||||||
Sbjct: 37 acattcattgctgtcggtgggtt 59
>31894_mmu-mir-181b-1:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||||||||||||||||
Sbjct: 13 acattcattgctgtcggtgggtt 35
>32764_rno-mir-181b-1:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||||||||||||||||
Sbjct: 37 acattcattgctgtcggtgggtt 59
>33246_bta-mir-181b-1:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||||||||||||||||
Sbjct: 37 acattcattgctgtcggtgggtt 59
>34008_ssc-mir-181b-1:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||||||||||||||||
Sbjct: 12 acattcattgctgtcggtgggtt 34
>26736_cfa-mir-181d:mirbase
Length = 64
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||| ||||||||||||
Sbjct: 2 acattcattgttgtcggtgggtt 24
>27772_mml-mir-181d:mirbase
Length = 137
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||| ||||||||||||
Sbjct: 37 acattcattgttgtcggtgggtt 59
>28488_hsa-mir-181d:mirbase
Length = 137
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||| ||||||||||||
Sbjct: 37 acattcattgttgtcggtgggtt 59
>30256_ptr-mir-181d:mirbase
Length = 136
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||| ||||||||||||
Sbjct: 36 acattcattgttgtcggtgggtt 58
>30870_ppy-mir-181d:mirbase
Length = 136
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||| ||||||||||||
Sbjct: 36 acattcattgttgtcggtgggtt 58
>31512_oan-mir-181c:mirbase
Length = 95
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
||||||||| |||||||||||||
Sbjct: 20 acattcattactgtcggtgggtt 42
>31897_mmu-mir-181d:mirbase
Length = 72
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||| ||||||||||||
Sbjct: 8 acattcattgttgtcggtgggtt 30
>32767_rno-mir-181d:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||| ||||||||||||
Sbjct: 12 acattcattgttgtcggtgggtt 34
>33249_bta-mir-181d:mirbase
Length = 113
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||| ||||||||||||
Sbjct: 36 acattcattgttgtcggtgggtt 58
>34011_ssc-mir-181d:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||| ||||||||||||
Sbjct: 10 acattcattgttgtcggtgggtt 32
>34012_ssc-mir-181d:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 13 acattcattgctgtcggtgggtt 35
|||||||||| ||||||||||||
Sbjct: 10 acattcattgttgtcggtgggtt 32
