miRNEST 2.0, an integrative microRNA resource :: BLAST
>41578_vvi-MIR162:mirbase
Length = 103
Score = 109 bits (55), Expect = 6e-25
Identities = 93/103 (90%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 23 tgaagtcactggaggcagcggttcatcgatctcttcctgaatttggttgtggaagaacac 82
||||||||||||| ||||||||||||||||||||||||||| || ||||| ||| || |
Sbjct: 1 tgaagtcactggatgcagcggttcatcgatctcttcctgaaatt-gttgt-gaaaaaagc 58
Query: 83 aaagcaagaatcggtcgataaacctctgcatccagcgctcact 125
| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 59 agatcaagaatcggtcgataaacctctgcatccagcgttcact 101
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 99.6 bits (50), Expect = 6e-22
Identities = 87/97 (89%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 25 aagtcactggaggcagcggttcatcgatctcttcct--gaatttggttgtggaagaacac 82
|||||||||||||||||||||||||||||||||||| |||||||| |||| || | |||
Sbjct: 7 aagtcactggaggcagcggttcatcgatctcttcctgggaatttgg-tgtgaaaaatcac 65
Query: 83 aaagcaagaatcggtcgataaacctctgcatccagcg 119
| | || |||||| |||||||||||||||||||||||
Sbjct: 66 agaacatgaatcgatcgataaacctctgcatccagcg 102
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 97.6 bits (49), Expect = 2e-21
Identities = 87/96 (90%), Gaps = 4/96 (4%)
Strand = Plus / Plus
Query: 29 cactggaggcagcggttcatcgatctcttcct--gaatttggttgtg-gaagaacacaaa 85
|||||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||
Sbjct: 22 cactggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaa 81
Query: 86 -gcaagaatcggtcgataaacctctgcatccagcgc 120
|| |||||| ||||||||||||||||||||||||
Sbjct: 82 tacatgaatcgatcgataaacctctgcatccagcgc 117
>40663_mtr-MIR162:mirbase
Length = 124
Score = 91.7 bits (46), Expect = 1e-19
Identities = 90/102 (88%), Gaps = 2/102 (1%)
Strand = Plus / Plus
Query: 27 gtcactggaggcagcggttcatcgatctcttcctgaatttggtt-gtggaagaacacaaa 85
||||||||| |||||||||||||||||| ||||||||||| ||| || || |||||
Sbjct: 17 gtcactggatgcagcggttcatcgatctgttcctgaattttgtttgtctcgtaaaacaaa 76
Query: 86 gcaagaatcggtcgataaacctctgcatccagcgctcacttt 127
|| ||||||||||||||||||||||||||||||||||||||
Sbjct: 77 -catgaatcggtcgataaacctctgcatccagcgctcacttt 117
>40437_gma-MIR162:mirbase
Length = 102
Score = 89.7 bits (45), Expect = 5e-19
Identities = 91/104 (87%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 22 gtgaagtcactggaggcagcggttcatcgatctcttcctgaatttggttgtggaagaaca 81
|||||||||||||| ||||||||||||||||||||||||||| | ||||| || | ||
Sbjct: 1 gtgaagtcactggatgcagcggttcatcgatctcttcctgaa--tcgttgtttaacatca 58
Query: 82 caaagcaagaatcggtcgataaacctctgcatccagcgctcact 125
|| || |||||| |||||||||||||||||||||||||||||
Sbjct: 59 -gaaccatgaatcgatcgataaacctctgcatccagcgctcact 101
>41090_tcc-MIR162:mirbase
Length = 131
Score = 83.8 bits (42), Expect = 3e-17
Identities = 83/93 (89%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 29 cactggaggcagcggttcatcgatctcttcct--gaatttggttgtg-gaagaacacaaa 85
|||||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||
Sbjct: 19 cactggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaataacacaaa 78
Query: 86 -gcaagaatcggtcgataaacctctgcatccag 117
|| || ||| |||||||||||||||||||||
Sbjct: 79 tacatgattcgatcgataaacctctgcatccag 111
>41220_csi-MIR162:mirbase
Length = 201
Score = 81.8 bits (41), Expect = 1e-16
Identities = 95/110 (86%), Gaps = 6/110 (5%)
Strand = Plus / Plus
Query: 22 gtgaagtcactggaggcagcggttcatcgatctcttcctg--aatttggttgtg--gaag 77
|||||||||||||||||||||||||||||||| ||| || ||||| |||||| ||
Sbjct: 80 gtgaagtcactggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaat 139
Query: 78 aacacaaa--gcaagaatcggtcgataaacctctgcatccagcgctcact 125
|||||||| || |||||| |||||||||||||||||||||||||||||
Sbjct: 140 aacacaaaatacatgaatcgatcgataaacctctgcatccagcgctcact 189
>40342_rco-MIR162:mirbase
Length = 101
Score = 71.9 bits (36), Expect = 1e-13
Identities = 85/100 (85%), Gaps = 6/100 (6%)
Strand = Plus / Plus
Query: 28 tcactggaggcagcggttcatcgatctcttcctg---aatttggttgtg---gaagaaca 81
|||||||||||||||||||||||||||||||||| |||| |||||| || || |
Sbjct: 1 tcactggaggcagcggttcatcgatctcttcctggaagattttgttgtgaaacaaaaata 60
Query: 82 caaagcaagaatcggtcgataaacctctgcatccagcgct 121
|| ||| |||||| |||||||||||||||||||||||||
Sbjct: 61 aaacgcatgaatcgatcgataaacctctgcatccagcgct 100
>40025_ath-MIR162b:mirbase
Length = 111
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 83 aaagcaagaatcggtcgataaacctctgcatccagcgct 121
||||||||||||| |||||||||||||||||||||||||
Sbjct: 65 aaagcaagaatcgatcgataaacctctgcatccagcgct 103
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 22 gtgaagtcactggaggcagcggttcatcgatc 53
|||||||| |||||||||||||||||||||||
Sbjct: 3 gtgaagtcgctggaggcagcggttcatcgatc 34
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 24 gaagtcactggaggcagcggttcatcgatctcttcctg 61
|||| |||||||||||||||||||||||||||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatctcttcctg 41
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 24 gaagtcactggaggcagcggttcatcgatctcttcctgaa 63
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctgaa 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 97 tcgataaacctctgcatccag 117
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 24 gaagtcactggaggcagcggttcatcgatctcttcctgaa 63
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctgaa 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 97 tcgataaacctctgcatccag 117
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>40024_ath-MIR162a:mirbase
Length = 140
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 26 agtcactggaggcagcggttcatcgatctcttcctg 61
|||| |||||||||||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 83 aaagcaagaatcggtcgataaacctctgcatccagcg 119
|||||| |||| | |||||||||||||||||||||||
Sbjct: 75 aaagcatgaatagatcgataaacctctgcatccagcg 111
>39812_aly-MIR162a:mirbase
Length = 228
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 26 agtcactggaggcagcggttcatcgatctcttcctg 61
|||| |||||||||||||||||||||||||||||||
Sbjct: 63 agtcgctggaggcagcggttcatcgatctcttcctg 98
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 83 aaagcaagaatcggtcgataaacctctgcatccagcg 119
|||||| |||| | |||||||||||||||||||||||
Sbjct: 122 aaagcatgaatagatcgataaacctctgcatccagcg 158
>39813_aly-MIR162b:mirbase
Length = 184
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 83 aaagcaagaatcggtcgataaacctctgcatccagcgct 121
|||||| |||||| |||||||||||||||||||||||||
Sbjct: 99 aaagcatgaatcgatcgataaacctctgcatccagcgct 137
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 22 gtgaagtcactggaggcagcggttcatcgatc 53
|||||||| |||||||||||||||||||||||
Sbjct: 41 gtgaagtcgctggaggcagcggttcatcgatc 72
>42708_zma-MIR162:mirbase
Length = 130
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 90 gaatcggtcgataaacctctgcatccag 117
||||||||||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41530_sly-MIR162:mirbase
Length = 99
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 90 gaatcggtcgataaacctctgcatccag 117
||||||||||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>42502_sbi-MIR162:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 90 gaatcggtcgataaacctctgcatccag 117
|||||| |||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 90 gaatcggtcgataaacctctgcatccag 117
|||||| |||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>41930_osa-MIR162b:mirbase
Length = 134
Score = 46.1 bits (23), Expect = 7e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 81 acaaagcaagaatcggtcgataaacctctgcatccagcgctcacttt 127
|||| ||| |||||| ||||||| ||||||||||||| ||||||||
Sbjct: 88 acaacgcaggaatcgatcgataagcctctgcatccagatctcacttt 134
>41736_bdi-MIR162:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 90 gaatcggtcgataaacctctgcatcc 115
|||||| |||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
