miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41623_vvi-MIR171b:mirbase
          Length = 99

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                             
Query: 40 aggtattggcgtgcctcaatttgaagacatggtta 74
          |||||||||||||||||||||| ||||||||||||
Sbjct: 8  aggtattggcgtgcctcaatttaaagacatggtta 42




>41281_ctr-MIR171:mirbase
          Length = 371

 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                  
Query: 36 atcaaggtattggcgtgcctcaatttgaagacatggttaa 75
          ||||||||||||||| |||||||||| ||||| |||||||
Sbjct: 37 atcaaggtattggcgcgcctcaatttaaagacgtggttaa 76




>40696_mtr-MIR171b:mirbase
          Length = 94

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 38 caaggtattggcgtgcctcaatttgaagacatgg 71
          ||||||||||||| ||||||||||||| ||||||
Sbjct: 3  caaggtattggcgcgcctcaatttgaatacatgg 36



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 101 attgagccgcgtcaatatct 120
           ||||||||||||||||||||
Sbjct: 71  attgagccgcgtcaatatct 90




>42553_sbi-MIR171h:mirbase
          Length = 81

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 attgagccgcgtcaatatctc 121
           |||||||||||||||||||||
Sbjct: 61  attgagccgcgtcaatatctc 81




>41989_osa-MIR171i:mirbase
          Length = 120

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 attgagccgcgtcaatatctc 121
           |||||||||||||||||||||
Sbjct: 90  attgagccgcgtcaatatctc 110



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 40 aggtattggcgtgcctcaat 59
          ||||||||||||||||||||
Sbjct: 8  aggtattggcgtgcctcaat 27




>42773_zma-MIR171m:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 101 attgagccgcgtcaatatct 120
           ||||||||||||||||||||
Sbjct: 63  attgagccgcgtcaatatct 82




>42772_zma-MIR171l:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 101 attgagccgcgtcaatatct 120
           ||||||||||||||||||||
Sbjct: 59  attgagccgcgtcaatatct 78