miRNEST 2.0, an integrative microRNA resource :: BLAST
>40426_gma-MIR156b:mirbase
Length = 120
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 ctcatgttgacagaagagagagagcacaacccgggaatggctaaaggagtctttgccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 ctcatgttgacagaagagagagagcacaacccgggaatggctaaaggagtctttgccttt 73
Query: 61 gttgggagtgtgccctctcttcctctgtcatcatca 96
||||||||||||||||||||||||||||||||||||
Sbjct: 74 gttgggagtgtgccctctcttcctctgtcatcatca 109
>40430_gma-MIR156f:mirbase
Length = 106
Score = 174 bits (88), Expect = 7e-45
Identities = 94/96 (97%)
Strand = Plus / Plus
Query: 1 ctcatgttgacagaagagagagagcacaacccgggaatggctaaaggagtctttgccttt 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5 ctcatgttgacagaagagagagagcacaacccgggaatggttaaaggagtctttgccttt 64
Query: 61 gttgggagtgtgccctctcttcctctgtcatcatca 96
||||||||||||| ||||||||||||||||||||||
Sbjct: 65 gttgggagtgtgctctctcttcctctgtcatcatca 100
>40334_rco-MIR156e:mirbase
Length = 95
Score = 115 bits (58), Expect = 6e-27
Identities = 87/94 (92%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 4 atgttgacagaagagagagagcacaacccgggaat-ggctaaaggagtctttgcctttgt 62
||||||||||||||||||||||||||||||| | | |||||||| |||||||||||||||
Sbjct: 2 atgttgacagaagagagagagcacaacccggcattaggctaaag-agtctttgcctttgt 60
Query: 63 tgggagtgtgccctctcttcctctgtcatcatca 96
||||||||||| ||||| || |||||||||||||
Sbjct: 61 tgggagtgtgctctctcctcttctgtcatcatca 94
>41080_tcc-MIR156a:mirbase
Length = 124
Score = 93.7 bits (47), Expect = 2e-20
Identities = 84/95 (88%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 3 catgttgacagaagagagagagcacaacccgggaatggctaaag-gagtctttgcctttg 61
|||||||||||||||||||||||||||||||| | ||||||| ||||||||| ||||
Sbjct: 16 catgttgacagaagagagagagcacaacccggcatcagctaaagaaagtctttgcttttg 75
Query: 62 ttgggagtgtgccctctcttcctctgtcatcatca 96
|||||||||||| ||||||| ||||||| |||||
Sbjct: 76 ttgggagtgtgctttctcttcttctgtcaccatca 110
>41561_vvi-MIR156a:mirbase
Length = 104
Score = 81.8 bits (41), Expect = 8e-17
Identities = 81/93 (87%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 4 atgttgacagaagagagagagcacaacccgggaatggctaaaggagtctttgcctttgtt 63
||||||||||||||||| ||||||||||| | | ||||||| | ||||||| ||| ||
Sbjct: 7 atgttgacagaagagagggagcacaacccagcatcagctaaag-actctttgcttttctt 65
Query: 64 gggagtgtgccctctcttcctctgtcatcatca 96
|||||||||| |||||||| |||||||||||||
Sbjct: 66 gggagtgtgctctctcttcttctgtcatcatca 98
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 73.8 bits (37), Expect = 2e-14
Identities = 80/93 (86%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 4 atgttgacagaagagagagagcacaacccg-ggaatggctaaaggagtctttgcctttgt 62
|||||||||||||||||||||||||||||| | ||||| |||| | ||| |||||||
Sbjct: 18 atgttgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgt 77
Query: 63 tgggagtgtgccctctcttcctctgtcatcatc 95
||||||||||| |||| || ||||||||||||
Sbjct: 78 tgggagtgtgctctctactcttctgtcatcatc 110
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 73.8 bits (37), Expect = 2e-14
Identities = 80/93 (86%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 4 atgttgacagaagagagagagcacaacccg-ggaatggctaaaggagtctttgcctttgt 62
|||||||||||||||||||||||||||||| | ||||| |||| | ||| |||||||
Sbjct: 14 atgttgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgt 73
Query: 63 tgggagtgtgccctctcttcctctgtcatcatc 95
||||||||||| |||| || ||||||||||||
Sbjct: 74 tgggagtgtgctctctactcttctgtcatcatc 106
>41204_aqc-MIR529:mirbase
Length = 125
Score = 67.9 bits (34), Expect = 1e-12
Identities = 80/94 (85%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 4 atgttgacagaagagagagagcacaacccgggaatggctaaag-gagtctttgcctttgt 62
||||||||||||||||||||||||||||| | ||||||| |||||||| | |||||
Sbjct: 14 atgttgacagaagagagagagcacaacccatcatcagctaaagagagtcttttcttttgt 73
Query: 63 tgggagtgtgccctctcttcctctgtcatcatca 96
||||||||||| || | || |||||||||||||
Sbjct: 74 tgggagtgtgctctttgctcttctgtcatcatca 107
>41298_ptc-MIR156k:mirbase
Length = 101
Score = 65.9 bits (33), Expect = 5e-12
Identities = 77/89 (86%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 3 catgttgacagaagagagagagcacaacccgggaatggctaaag-gagtctttgcctttg 61
|||| ||||||||||||| ||||||||||| | ||| ||||||| |||||||||| ||||
Sbjct: 6 catgctgacagaagagagggagcacaaccctgtaatagctaaagagagtctttgcttttg 65
Query: 62 ttgggagtgtgccctctcttcctctgtca 90
|| ||| ||||| ||||||| |||||||
Sbjct: 66 tt-ggactgtgctttctcttcttctgtca 93
>41914_osa-MIR156k:mirbase
Length = 106
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 8 tgacagaagagagagagcacaacccgg 34
|||||||||||||||||||||||||||
Sbjct: 11 tgacagaagagagagagcacaacccgg 37
>42687_zma-MIR156j:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 tgacagaagagagagagcacaaccc 32
|||||||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45
>42488_sbi-MIR156d:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 tgacagaagagagagagcacaaccc 32
|||||||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45
>40009_ath-MIR156h:mirbase
Length = 106
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 4 atgttgacagaagagagagagcacaacccggga 36
|||||||||||||| ||||||||||||| ||||
Sbjct: 8 atgttgacagaagaaagagagcacaacctggga 40
>39797_aly-MIR156h:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 4 atgttgacagaagagagagagcacaacccggga 36
|||||||||||||| ||||||||||||| ||||
Sbjct: 4 atgttgacagaagaaagagagcacaacctggga 36
>41867_far-MIR156b:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 gttgacagaagagagagagcaca 28
|||||||||||||||||||||||
Sbjct: 52 gttgacagaagagagagagcaca 74
>41866_far-MIR156a:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 gttgacagaagagagagagcaca 28
|||||||||||||||||||||||
Sbjct: 52 gttgacagaagagagagagcaca 74
>41726_bdi-MIR156:mirbase
Length = 147
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 gttgacagaagagagagagcaca 28
|||||||||||||||||||||||
Sbjct: 99 gttgacagaagagagagagcaca 121
>40427_gma-MIR156c:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcacaacc 31
||||||||||||| |||||||||||||
Sbjct: 144 tgttgacagaagatagagagcacaacc 170
>41877_far-MIR529:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 ttgacagaagagagagagcaca 28
||||||||||||||||||||||
Sbjct: 47 ttgacagaagagagagagcaca 68
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcacaac 30
||||||||||||| ||||||||||||
Sbjct: 9 tgttgacagaagatagagagcacaac 34
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcacaac 30
||||||||||||| ||||||||||||
Sbjct: 19 tgttgacagaagatagagagcacaac 44
>40335_rco-MIR156f:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcacaac 30
||||||||||||| ||||||||||||
Sbjct: 4 tgttgacagaagatagagagcacaac 29
>40648_mtr-MIR156:mirbase
Length = 460
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 8 tgacagaagagagagagcaca 28
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcacaa 29
||||||||||||| |||||||||||
Sbjct: 21 tgttgacagaagatagagagcacaa 45
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcacaa 29
||||||||||||| |||||||||||
Sbjct: 21 tgttgacagaagatagagagcacaa 45
>41913_osa-MIR156j:mirbase
Length = 165
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
|||||||||||||||| |||||||
Sbjct: 39 tgttgacagaagagagtgagcaca 62
>41911_osa-MIR156h:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
|||||||||||||||| |||||||
Sbjct: 6 tgttgacagaagagagtgagcaca 29
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
||||||||||||| ||||||||||
Sbjct: 19 tgttgacagaagatagagagcaca 42
>41077_gra-MIR157b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
||||||||||||| ||||||||||
Sbjct: 3 tgttgacagaagatagagagcaca 26
>41076_gra-MIR157a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
||||||||||||| ||||||||||
Sbjct: 3 tgttgacagaagatagagagcaca 26
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40431_gma-MIR156g:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
||||||||||||| ||||||||||
Sbjct: 22 tgttgacagaagatagagagcaca 45
>40428_gma-MIR156d:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
||||||||||||| ||||||||||
Sbjct: 19 tgttgacagaagatagagagcaca 42
>40337_rco-MIR156h:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40011_ath-MIR157b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
||||||||||||| ||||||||||
Sbjct: 17 tgttgacagaagatagagagcaca 40
>40010_ath-MIR157a:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
||||||||||||| ||||||||||
Sbjct: 2 tgttgacagaagatagagagcaca 25
>39799_aly-MIR157b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
||||||||||||| ||||||||||
Sbjct: 2 tgttgacagaagatagagagcaca 25
>39798_aly-MIR157a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 tgttgacagaagagagagagcaca 28
||||||||||||| ||||||||||
Sbjct: 14 tgttgacagaagatagagagcaca 37
>39416_pta-MIR156b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 tgacagaagagagagagcacaacc 31
|||||||||| |||||||||||||
Sbjct: 3 tgacagaagatagagagcacaacc 26
