miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>31630_oan-mir-1388:mirbase
          Length = 95

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 55 ggtcaatctcaggttcgtcagcccatgaaa 84
          ||||||||||||||||||||||||||||||
Sbjct: 53 ggtcaatctcaggttcgtcagcccatgaaa 82

>26544_tgu-mir-1388:mirbase
          Length = 92

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 55 ggtcaatctcaggttcgtcagcccatga 82
          ||||||||||||||||||||||||||||
Sbjct: 56 ggtcaatctcaggttcgtcagcccatga 83

>33490_bta-mir-1388:mirbase
          Length = 92

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 22 caggactgtccaacctgagaatg 44
          |||||||||||||||||||||||
Sbjct: 16 caggactgtccaacctgagaatg 38

>33491_bta-mir-1388:mirbase
          Length = 92

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 22 caggactgtccaacctgagaatg 44
          |||||||||||||||||||||||
Sbjct: 16 caggactgtccaacctgagaatg 38