miRNEST 2.0, an integrative microRNA resource :: BLAST
>40731_mtr-MIR399a:mirbase
Length = 134
Score = 85.7 bits (43), Expect = 7e-18
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 72 tttcttaatgtgcaatctgccaaaggagatttgcccagcgattctcc 118
||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 78 tttcttagtgtgcaatctgccaaaggagatttgcccagcgattctcc 124
>40736_mtr-MIR399f:mirbase
Length = 104
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 74 tcttaatgtgcaatctgccaaaggagatttgcccagcgatt 114
||||| |||||||||||||||||||||||||||||||||||
Sbjct: 64 tcttagtgtgcaatctgccaaaggagatttgcccagcgatt 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 8 ttacagggcaagttctccattggcaggtagc 38
|||||||| |||||||||||||||||||||
Sbjct: 1 ttacagggtgagttctccattggcaggtagc 31
>40735_mtr-MIR399e:mirbase
Length = 134
Score = 69.9 bits (35), Expect = 4e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 75 cttaatgtgcaatctgccaaaggagatttgcccagcgattctc 117
|||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 81 cttagtgtgtaatctgccaaaggagatttgcccagcgattctc 123
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 7 attacagggcaagttctccattggcaggtagc 38
||||||||| |||||||||||||||||||||
Sbjct: 17 attacagggtgagttctccattggcaggtagc 48
>42047_osa-MIR399g:mirbase
Length = 119
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 86 atctgccaaaggagatttgcccagcgattc 115
||||||||||||||||||||||||||||||
Sbjct: 86 atctgccaaaggagatttgcccagcgattc 115
>41457_ptc-MIR399j:mirbase
Length = 112
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 4 tgcattacagggcaagttctccattggcaggtagccacta 43
|||||||||||||||| ||||||||||||| ||||||||
Sbjct: 1 tgcattacagggcaagacctccattggcaggcagccacta 40
>41147_tcc-MIR399b:mirbase
Length = 135
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 3 ctgcattacagggcaagttctccattggcaggtagccact 42
||||||||||||||||| | |||||||||||| |||||||
Sbjct: 13 ctgcattacagggcaagatttccattggcaggcagccact 52
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgcccagcgattct 116
||||||||||||||||||||| || |||||
Sbjct: 93 tctgccaaaggagatttgcccggcaattct 122
>40737_mtr-MIR399g:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 8 ttacagggcaagttctccattggcaggtagcca 40
|||||||||| ||||||| ||||||||||||||
Sbjct: 1 ttacagggcatgttctcctttggcaggtagcca 33
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 ctgccaaaggagatttgcccagc 110
|||||||||||||||||||||||
Sbjct: 78 ctgccaaaggagatttgcccagc 100
>42594_sbi-MIR399f:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgcccagc 110
||||||||||||||||||||||||
Sbjct: 79 tctgccaaaggagatttgcccagc 102
>42046_osa-MIR399f:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgcccagc 110
||||||||||||||||||||||||
Sbjct: 85 tctgccaaaggagatttgcccagc 108
>40387_rco-MIR399e:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 8 ttacagggcaagt-tctccattggcaggtagccact 42
||||||||||| | ||||||||||||||||||||||
Sbjct: 1 ttacagggcaaatatctccattggcaggtagccact 36
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgcccagc 110
||||||||||||||||||||||||
Sbjct: 81 tctgccaaaggagatttgcccagc 104
>42593_sbi-MIR399e:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 ctgccaaaggagatttgcccagc 110
|||||||||||||||||||||||
Sbjct: 86 ctgccaaaggagatttgcccagc 108
>42045_osa-MIR399e:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 ctgccaaaggagatttgcccagc 110
|||||||||||||||||||||||
Sbjct: 87 ctgccaaaggagatttgcccagc 109
>39893_aly-MIR399j:mirbase
Length = 136
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 4 tgcattacagggcaagttctccattggcagg 34
|||||||||||||||| |||| |||||||||
Sbjct: 12 tgcattacagggcaagatctctattggcagg 42
>41672_vvi-MIR399e:mirbase
Length = 112
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgcccagcgattct 116
||||||||||||||||||||| || |||||
Sbjct: 80 tctgccaaaggagatttgcccggcaattct 109
>41149_tcc-MIR399d:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgcccagcgattct 116
||||||||||||||||||||| || |||||
Sbjct: 94 tctgccaaaggagatttgcccggcaattct 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 30/32 (93%), Gaps = 1/32 (3%)
Strand = Plus / Plus
Query: 4 tgcattacagggc-aagttctccattggcagg 34
||||||||||||| ||| ||||||||||||||
Sbjct: 14 tgcattacagggcaaagatctccattggcagg 45
>40097_ath-MIR399f:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 tgcattacagggcaagttctccattggcag 33
|||||||||||||||| || ||||||||||
Sbjct: 4 tgcattacagggcaagatcaccattggcag 33
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgccc 107
|||||||||||||||||||||
Sbjct: 86 tctgccaaaggagatttgccc 106
>40092_ath-MIR399a:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 atctgccaaaggagatttgccc 107
||||||||||||||||||||||
Sbjct: 90 atctgccaaaggagatttgccc 111
>41246_csi-MIR399a:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgccc 107
|||||||||||||||||||||
Sbjct: 112 tctgccaaaggagatttgccc 132
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 7 attacagggcaagttctccattggcagg 34
|||||||||||| ||||||||||||||
Sbjct: 28 attacagggcaacatctccattggcagg 55
>41148_tcc-MIR399c:mirbase
Length = 141
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgcccagcgattc 115
|||||||| ||||||||||||||| ||||
Sbjct: 99 tctgccaatggagatttgcccagcaattc 127
>40385_rco-MIR399c:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 89 tgccaaaggagatttgcccagcgat 113
||||||||||||||||||| |||||
Sbjct: 71 tgccaaaggagatttgcccggcgat 95
>40299_bna-MIR399:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgccc 107
|||||||||||||||||||||
Sbjct: 79 tctgccaaaggagatttgccc 99
>40095_ath-MIR399d:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgccc 107
|||||||||||||||||||||
Sbjct: 68 tctgccaaaggagatttgccc 88
>39889_aly-MIR399f:mirbase
Length = 167
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgccc 107
|||||||||||||||||||||
Sbjct: 110 tctgccaaaggagatttgccc 130
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 6 cattacagggcaagttctccattggcag 33
|||||||||||||| || ||||||||||
Sbjct: 30 cattacagggcaagatcaccattggcag 57
>39887_aly-MIR399d:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgccc 107
|||||||||||||||||||||
Sbjct: 82 tctgccaaaggagatttgccc 102
>39884_aly-MIR399a:mirbase
Length = 162
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgccc 107
|||||||||||||||||||||
Sbjct: 111 tctgccaaaggagatttgccc 131
>42821_zma-MIR399c:mirbase
Length = 207
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 89 tgccaaaggagatttgcccagcgattct 116
|||||||||||| |||||| ||||||||
Sbjct: 168 tgccaaaggagaattgccctgcgattct 195
>42591_sbi-MIR399c:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 89 tgccaaaggagatttgcccagcgattct 116
|||||||||||| |||||| ||||||||
Sbjct: 91 tgccaaaggagaattgccctgcgattct 118
>41674_vvi-MIR399g:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 ctgccaaaggagatttgccc 107
||||||||||||||||||||
Sbjct: 82 ctgccaaaggagatttgccc 101
>41450_ptc-MIR399c:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 4 tgcattacagggcaagttctccattggcaggtagccacta 43
|||||||||||||||| | |||||||||| | ||||||||
Sbjct: 9 tgcattacagggcaagct-tccattggcatgcagccacta 47
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 89 tgccaaaggagatttgcccagcgattct 116
||||||||||||||||||| || |||||
Sbjct: 97 tgccaaaggagatttgcccggcaattct 124
>41449_ptc-MIR399b:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 4 tgcattacagggcaagttctccattggcaggtagccacta 43
|||||||||||||||| | |||||||||| | ||||||||
Sbjct: 9 tgcattacagggcaagct-tccattggcatgcagccacta 47
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 89 tgccaaaggagatttgcccagcgattct 116
||||||||||||||||||| || |||||
Sbjct: 97 tgccaaaggagatttgcccggcaattct 124
>41448_ptc-MIR399a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 ctgccaaaggagatttgccc 107
||||||||||||||||||||
Sbjct: 90 ctgccaaaggagatttgccc 109
>41153_tcc-MIR399h:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 ctgccaaaggagatttgccc 107
||||||||||||||||||||
Sbjct: 76 ctgccaaaggagatttgccc 95
>40388_rco-MIR399f:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 atctgccaaaggagatttgc 105
||||||||||||||||||||
Sbjct: 59 atctgccaaaggagatttgc 78
>40384_rco-MIR399b:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 ctgccaaaggagatttgccc 107
||||||||||||||||||||
Sbjct: 80 ctgccaaaggagatttgccc 99
>40096_ath-MIR399e:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgcc 106
||||||||||||||||||||
Sbjct: 77 tctgccaaaggagatttgcc 96
>39892_aly-MIR399i:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 ctgccaaaggagatttgccc 107
||||||||||||||||||||
Sbjct: 91 ctgccaaaggagatttgccc 110
>39891_aly-MIR399h:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 7 attacagggcaagttctccattggcagg 34
||||||||||||| |||| |||||||||
Sbjct: 1 attacagggcaagatctctattggcagg 28
>39890_aly-MIR399g:mirbase
Length = 157
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 ctgccaaaggagatttgccc 107
||||||||||||||||||||
Sbjct: 110 ctgccaaaggagatttgccc 129
>39888_aly-MIR399e:mirbase
Length = 191
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgcc 106
||||||||||||||||||||
Sbjct: 116 tctgccaaaggagatttgcc 135
