miRNEST 2.0, an integrative microRNA resource :: BLAST
>40565_gma-MIR4361:mirbase
Length = 63
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 23 ttgatccgtaagcttcttacggatcaacttgatccgtaag 62
|||||||||||| |||| |||||||||||||||||||||
Sbjct: 59 ttgatccgtaagtctcttccggatcaacttgatccgtaag 20
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 14 cggatcaacttgatccgtaagcttcttacggatcaacttg 53
||||||||||||||||||||| ||| ||||||||||||
Sbjct: 40 cggatcaacttgatccgtaagagacttccggatcaacttg 1
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 23 ttgatccgtaagcttcttacggatcaacttgatccg 58
|||||||| ||| ||||||||||||| ||||||||
Sbjct: 5 ttgatccggaagtctcttacggatcaagttgatccg 40
>40549_gma-MIR4347:mirbase
Length = 141
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 32 aagcttcttacggatcaacttgatccgtaag 62
|||||||||||||||||| ||||||||||||
Sbjct: 10 aagcttcttacggatcaagttgatccgtaag 40
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 14 cggatcaacttgatccgtaagcttcttacggatcaacttgatc 56
|||||||| |||||||| |||||||||||| ||||| ||||||
Sbjct: 94 cggatcaaattgatccgcaagcttcttacgaatcaagttgatc 52
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 38 cttacggatcaacttgatccgtaag 62
|||||||||||||||||||||||||
Sbjct: 40 cttacggatcaacttgatccgtaag 16
Score = 48.1 bits (24), Expect = 2e-06
Identities = 45/51 (88%), Gaps = 2/51 (3%)
Strand = Plus / Plus
Query: 14 cggatcaacttgatccgtaagcttc--ttacggatcaacttgatccgtaag 62
|||||||| |||||||||||||||| || | |||||||||||| ||||||
Sbjct: 20 cggatcaagttgatccgtaagcttcttttgccgatcaacttgattcgtaag 70
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 85 caacttgatccataagaagcttgcggatca 114
||||||||| | ||||||||||||||||||
Sbjct: 55 caacttgattcgtaagaagcttgcggatca 84
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 85 caacttgatccataagaagcttgcggatca 114
||||||||| ||||||||||||||| ||||
Sbjct: 111 caacttgattcataagaagcttgcgaatca 140
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 14 cggatcaacttgatccgtaag 34
|||||||||||||||||||||
Sbjct: 36 cggatcaacttgatccgtaag 16
Score = 42.1 bits (21), Expect = 1e-04
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 11 ttgcggatcaacttgatccgtaagcttcttacggatcaacttgatccgt 59
|||| |||||||||||| |||||| ||| |||||||| |||||||||
Sbjct: 47 ttgccgatcaacttgattcgtaagaagcttgcggatcaatttgatccgt 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 80 cggaccaacttgatccataagaagcttg 107
|||| ||||||||||| |||||||||||
Sbjct: 36 cggatcaacttgatccgtaagaagcttg 9
>40544_gma-MIR4343a:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 1e-07
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 14 cggatcaacttgatccgtaagcttcttacggatcaacttgatccgtaagt 63
|||||||| ||||| ||||||| | |||| |||||||||||||||||||
Sbjct: 71 cggatcaagttgattcgtaagccttttacaaatcaacttgatccgtaagt 22
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 38 cttacggatcaacttgatccgtaag 62
|||||| ||||||||||||||||||
Sbjct: 51 cttacgaatcaacttgatccgtaag 75
>40525_gma-MIR1526:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 15 ggatcaacttgatccgtaagcttcttacggatcaacttgatccg 58
|||||||||| ||||| ||| ||||||||||||| ||||||||
Sbjct: 93 ggatcaacttaatccggaagtctcttacggatcaagttgatccg 50
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 37 tcttacggatcaacttgatccgtaag 62
|||| |||||||||||||||||||||
Sbjct: 45 tcttccggatcaacttgatccgtaag 70
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 cggatcaacttgatccgtaag 34
|||||||||||||||||||||
Sbjct: 50 cggatcaacttgatccgtaag 70
>40575_gma-MIR4369:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 14 cggatcaacttgatccgtaagcttcttacggatcaactt 52
||||||||||||||||| ||| |||||||||||||||
Sbjct: 12 cggatcaacttgatccggaagagacttacggatcaactt 50
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 23 ttgatccgtaagcttcttacggatcaacttgatccg 58
|||||||||||| |||| |||||||| ||||||||
Sbjct: 47 ttgatccgtaagtctcttccggatcaagttgatccg 12
