miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34773_tni-mir-199-2:mirbase
Length = 73
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 ccgcctgcccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgcctgcccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcac 60
Query: 61 attggttaggctg 73
|||||||||||||
Sbjct: 61 attggttaggctg 73
>34353_dre-mir-199-2:mirbase
Length = 96
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 1 ccgcctgcccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcac 60
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 23 ccgcctgcccagtgttcagactacctgttcaggaattagtgtttgtacagtagtctgcac 82
Query: 61 attggttaggctg 73
|||||||||||||
Sbjct: 83 attggttaggctg 95
>25988_gga-mir-199-1:mirbase
Length = 94
Score = 89.7 bits (45), Expect = 2e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 5 ctgcccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattg 64
|||||||||||||||||||||||||||||| | | ||||||||||||||||||||||
Sbjct: 12 ctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattg 71
Query: 65 gttaggctg 73
|||||||||
Sbjct: 72 gttaggctg 80
>26494_tgu-mir-199-1:mirbase
Length = 71
Score = 85.7 bits (43), Expect = 4e-18
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 7 gcccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggt 66
|||||||||||||||||||||||||||| | | ||||||||||||||||||||||||
Sbjct: 1 gcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggt 60
Query: 67 taggctg 73
|||||||
Sbjct: 61 taggctg 67
>26495_tgu-mir-199-1:mirbase
Length = 71
Score = 85.7 bits (43), Expect = 4e-18
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 7 gcccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggt 66
|||||||||||||||||||||||||||| | | ||||||||||||||||||||||||
Sbjct: 1 gcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggt 60
Query: 67 taggctg 73
|||||||
Sbjct: 61 taggctg 67
>25517_pma-mir-199a:mirbase
Length = 79
Score = 83.8 bits (42), Expect = 2e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 11 cccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgcacattggtt 70
Query: 68 ag 69
||
Sbjct: 71 ag 72
>25818_xtr-mir-199a:mirbase
Length = 96
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 19 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 78
Query: 68 ag 69
||
Sbjct: 79 ag 80
>25989_gga-mir-199-2:mirbase
Length = 108
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 29 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 88
Query: 68 ag 69
||
Sbjct: 89 ag 90
>26496_tgu-mir-199-2:mirbase
Length = 128
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 26 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 85
Query: 68 ag 69
||
Sbjct: 86 ag 87
>26497_tgu-mir-199-2:mirbase
Length = 128
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 26 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 85
Query: 68 ag 69
||
Sbjct: 86 ag 87
>27582_lla-mir-199a:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>27623_sla-mir-199a:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>27795_mml-mir-199a-1:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>28231_mne-mir-199a:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>28326_ggo-mir-199a:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>28514_hsa-mir-199a-2:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>28515_hsa-mir-199a-2:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>30115_ppa-mir-199a:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>30277_ptr-mir-199a-2:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>30892_ppy-mir-199a:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>30893_ppy-mir-199a-2:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>30894_ppy-mir-199a-2:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>31527_oan-mir-199:mirbase
Length = 118
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>31920_mmu-mir-199a-2:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>31921_mmu-mir-199a-2:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>32786_rno-mir-199a:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>32787_rno-mir-199a:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>33272_bta-mir-199a-1:mirbase
Length = 104
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>33273_bta-mir-199a-1:mirbase
Length = 104
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 68 ag 69
||
Sbjct: 91 ag 92
>34029_ssc-mir-199a-1:mirbase
Length = 76
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 9 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 68
Query: 68 ag 69
||
Sbjct: 69 ag 70
>26757_cfa-mir-199-2:mirbase
Length = 59
Score = 69.9 bits (35), Expect = 2e-13
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 9 ccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
|||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 1 ccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 59
>27083_eca-mir-199a:mirbase
Length = 61
Score = 69.9 bits (35), Expect = 2e-13
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggt 66
||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 1 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggt 59
>27084_eca-mir-199a:mirbase
Length = 61
Score = 69.9 bits (35), Expect = 2e-13
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggt 66
||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 1 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggt 59
>34352_dre-mir-199-1:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 2e-13
Identities = 58/63 (92%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcagga-agtagtggttgtacagtagtctgcacattggt 66
||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||
Sbjct: 15 cccagtgttcagactacctgttcaggatcatactgg-tgtacagtagtctgcacattggt 73
Query: 67 tag 69
|||
Sbjct: 74 tag 76
>34625_fru-mir-199-1:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 2e-13
Identities = 58/63 (92%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcagga-agtagtggttgtacagtagtctgcacattggt 66
||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||
Sbjct: 15 cccagtgttcagactacctgttcaggattttactgg-tgtacagtagtctgcacattggt 73
Query: 67 tag 69
|||
Sbjct: 74 tag 76
>31918_mmu-mir-199a-1:mirbase
Length = 70
Score = 65.9 bits (33), Expect = 4e-12
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggt-tgtacagtagtctgcacattggt 66
||||||||||||||||||||||||||| | | | |||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctgggacatgtacagtagtctgcacattggt 65
Query: 67 taggc 71
|||||
Sbjct: 66 taggc 70
>31919_mmu-mir-199a-1:mirbase
Length = 70
Score = 65.9 bits (33), Expect = 4e-12
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcaggaagtagtggt-tgtacagtagtctgcacattggt 66
||||||||||||||||||||||||||| | | | |||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctgggacatgtacagtagtctgcacattggt 65
Query: 67 taggc 71
|||||
Sbjct: 66 taggc 70
>34354_dre-mir-199-3:mirbase
Length = 98
Score = 63.9 bits (32), Expect = 1e-11
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 2 cgcctgcccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcaca 61
|||||||||||||||||||||||||||||| | | | | || ||||||||| |||||
Sbjct: 10 cgcctgcccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcaca 69
Query: 62 ttggttaggctg 73
||||||||||||
Sbjct: 70 ttggttaggctg 81
>27417_mdo-mir-199b:mirbase
Length = 89
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 43 ttgtacagtagtctgcacattggttaggctg 73
|||||||||||||||||||||||||||||||
Sbjct: 50 ttgtacagtagtctgcacattggttaggctg 80
>28516_hsa-mir-199b:mirbase
Length = 110
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 43 ttgtacagtagtctgcacattggttaggctg 73
|||||||||||||||||||||||||||||||
Sbjct: 61 ttgtacagtagtctgcacattggttaggctg 91
>28517_hsa-mir-199b:mirbase
Length = 110
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 43 ttgtacagtagtctgcacattggttaggctg 73
|||||||||||||||||||||||||||||||
Sbjct: 61 ttgtacagtagtctgcacattggttaggctg 91
>30278_ptr-mir-199b:mirbase
Length = 109
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 43 ttgtacagtagtctgcacattggttaggctg 73
|||||||||||||||||||||||||||||||
Sbjct: 61 ttgtacagtagtctgcacattggttaggctg 91
>31922_mmu-mir-199b:mirbase
Length = 110
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 43 ttgtacagtagtctgcacattggttaggctg 73
|||||||||||||||||||||||||||||||
Sbjct: 61 ttgtacagtagtctgcacattggttaggctg 91
>33276_bta-mir-199b:mirbase
Length = 100
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 43 ttgtacagtagtctgcacattggttaggctg 73
|||||||||||||||||||||||||||||||
Sbjct: 51 ttgtacagtagtctgcacattggttaggctg 81
>33794_bta-mir-3604-2:mirbase
Length = 73
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 43 ttgtacagtagtctgcacattggttaggctg 73
|||||||||||||||||||||||||||||||
Sbjct: 31 ttgtacagtagtctgcacattggttaggctg 1
>34032_ssc-mir-199b:mirbase
Length = 74
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 43 ttgtacagtagtctgcacattggttaggctg 73
|||||||||||||||||||||||||||||||
Sbjct: 43 ttgtacagtagtctgcacattggttaggctg 73
>33793_bta-mir-3604-1:mirbase
Length = 78
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 44 tgtacagtagtctgcacattggttaggctg 73
||||||||||||||||||||||||||||||
Sbjct: 32 tgtacagtagtctgcacattggttaggctg 3
>34030_ssc-mir-199a-2:mirbase
Length = 80
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttaggctg 73
||||||||||||||||||||||||||||||
Sbjct: 48 tgtacagtagtctgcacattggttaggctg 77
>34031_ssc-mir-199a-2:mirbase
Length = 80
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttaggctg 73
||||||||||||||||||||||||||||||
Sbjct: 48 tgtacagtagtctgcacattggttaggctg 77
>27085_eca-mir-199b:mirbase
Length = 69
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 43 ttgtacagtagtctgcacattggttaggc 71
|||||||||||||||||||||||||||||
Sbjct: 41 ttgtacagtagtctgcacattggttaggc 69
>27086_eca-mir-199b:mirbase
Length = 69
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 43 ttgtacagtagtctgcacattggttaggc 71
|||||||||||||||||||||||||||||
Sbjct: 41 ttgtacagtagtctgcacattggttaggc 69
>34627_fru-mir-199-3:mirbase
Length = 99
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 3 gcctgcccagtgttcagactacctgttca 31
|||||||||||||||||||||||||||||
Sbjct: 12 gcctgcccagtgttcagactacctgttca 40
>34774_tni-mir-199-3:mirbase
Length = 95
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 3 gcctgcccagtgttcagactacctgttca 31
|||||||||||||||||||||||||||||
Sbjct: 10 gcctgcccagtgttcagactacctgttca 38
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 47 acagtagtctgcacattggtta 68
||||||||||||||||||||||
Sbjct: 54 acagtagtctgcacattggtta 75
>27796_mml-mir-199a-2:mirbase
Length = 71
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttaggc 71
||||||||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattggttaggc 71
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcagga 34
|||||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagga 32
>27797_mml-mir-199a-2:mirbase
Length = 71
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttaggc 71
||||||||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattggttaggc 71
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcagga 34
|||||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagga 32
>28512_hsa-mir-199a-1:mirbase
Length = 71
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttaggc 71
||||||||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattggttaggc 71
>28513_hsa-mir-199a-1:mirbase
Length = 71
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttaggc 71
||||||||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattggttaggc 71
>33274_bta-mir-199a-2:mirbase
Length = 71
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttaggc 71
||||||||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattggttaggc 71
>33275_bta-mir-199a-2:mirbase
Length = 71
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttaggc 71
||||||||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattggttaggc 71
>30276_ptr-mir-199a-1:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcagga 34
|||||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagga 32
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttagg 70
|||||||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattggttagg 70
>30895_ppy-mir-199b:mirbase
Length = 111
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 43 ttgtacagtagtctgcacattggttaggctg 73
|||||||||| ||||||||||||||||||||
Sbjct: 62 ttgtacagtattctgcacattggttaggctg 92
>30896_ppy-mir-199b:mirbase
Length = 111
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 43 ttgtacagtagtctgcacattggttaggctg 73
|||||||||| ||||||||||||||||||||
Sbjct: 62 ttgtacagtattctgcacattggttaggctg 92
>34772_tni-mir-199-1:mirbase
Length = 86
Score = 54.0 bits (27), Expect = 1e-08
Identities = 56/63 (88%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttcag-gaagtagtggttgtacagtagtctgcacattggt 66
|||||||||||||||||||||||| | || |||| ||||||||||||||||||||||
Sbjct: 14 cccagtgttcagactacctgttcattgtcatactggt-gtacagtagtctgcacattggt 72
Query: 67 tag 69
|||
Sbjct: 73 tag 75
>25518_pma-mir-199b:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggttag 69
||||||||||||||||||||||||||
Sbjct: 48 tgtacagtagtctgcacattggttag 73
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 ctgcccagtgttcagactacctgttca 31
||||||||||||| |||||||||||||
Sbjct: 8 ctgcccagtgttctgactacctgttca 34
>26756_cfa-mir-199-1:mirbase
Length = 61
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 ccagtgttcagactacctgttcagg 33
|||||||||||||||||||||||||
Sbjct: 1 ccagtgttcagactacctgttcagg 25
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattggtt 67
||||||||||||||||||||||||
Sbjct: 38 tgtacagtagtctgcacattggtt 61
>26758_cfa-mir-199-3:mirbase
Length = 59
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 ttgtacagtagtctgcacattggtt 67
|||||||||||||||||||||||||
Sbjct: 35 ttgtacagtagtctgcacattggtt 59
>33277_bta-mir-199c:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 tgtacagtagtctgcacattgg 65
||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattgg 65
>24847_cin-mir-199:mirbase
Length = 102
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 47 acagtagtctgcacattgg 65
|||||||||||||||||||
Sbjct: 66 acagtagtctgcacattgg 84
>25819_xtr-mir-199b:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 8 cccagtgttcagactacctgttc 30
||||||||||||||||| |||||
Sbjct: 31 cccagtgttcagactacgtgttc 53
