miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34785_tni-mir-216a:mirbase
Length = 73
Score = 137 bits (69), Expect = 1e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 1 ttggtaaaatctcagctggcaactgtgagtcgttcactagctgctctcacaatggcctct 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttggtgaaatctcagctggcaactgtgagtcgttcactagctgctctcacaatggcctct 60
Query: 61 gggattatgctaa 73
|||||||||||||
Sbjct: 61 gggattatgctaa 73
>24696_bfl-mir-216:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgagtc 31
||||||||||||||||||||||||
Sbjct: 10 aatctcagctggcaactgtgagtc 33
>25528_pma-mir-216a:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgagt 30
|||||||||||||||||||||||
Sbjct: 13 aatctcagctggcaactgtgagt 35
>34369_dre-mir-216a-1:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgagt 30
|||||||||||||||||||||||
Sbjct: 16 aatctcagctggcaactgtgagt 38
>34370_dre-mir-216a-2:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgagt 30
|||||||||||||||||||||||
Sbjct: 16 aatctcagctggcaactgtgagt 38
>25835_xtr-mir-216:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgag 29
||||||||||||||||||||||
Sbjct: 18 aatctcagctggcaactgtgag 39
>26003_gga-mir-216:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgag 29
||||||||||||||||||||||
Sbjct: 20 aatctcagctggcaactgtgag 41
>26511_tgu-mir-216a:mirbase
Length = 72
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgag 29
||||||||||||||||||||||
Sbjct: 12 aatctcagctggcaactgtgag 33
>26775_cfa-mir-216a:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgag 29
||||||||||||||||||||||
Sbjct: 20 aatctcagctggcaactgtgag 41
>27099_eca-mir-216a:mirbase
Length = 58
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgag 29
||||||||||||||||||||||
Sbjct: 2 aatctcagctggcaactgtgag 23
>27430_mdo-mir-216:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgag 29
||||||||||||||||||||||
Sbjct: 20 aatctcagctggcaactgtgag 41
>27811_mml-mir-216a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgag 29
||||||||||||||||||||||
Sbjct: 20 aatctcagctggcaactgtgag 41
>28332_ggo-mir-216:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgag 29
||||||||||||||||||||||
Sbjct: 20 aatctcagctggcaactgtgag 41
>28533_hsa-mir-216a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgag 29
||||||||||||||||||||||
Sbjct: 20 aatctcagctggcaactgtgag 41
>30119_ppa-mir-216:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgag 29
||||||||||||||||||||||
Sbjct: 20 aatctcagctggcaactgtgag 41
>30909_ppy-mir-216:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgag 29
||||||||||||||||||||||
Sbjct: 20 aatctcagctggcaactgtgag 41
>31408_lca-mir-216:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgag 29
||||||||||||||||||||||
Sbjct: 20 aatctcagctggcaactgtgag 41
>31536_oan-mir-216:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgag 29
||||||||||||||||||||||
Sbjct: 31 aatctcagctggcaactgtgag 52
>31943_mmu-mir-216a:mirbase
Length = 72
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgag 29
||||||||||||||||||||||
Sbjct: 8 aatctcagctggcaactgtgag 29
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 46 ctcacaatggcctctgggattatgctaa 73
|||||| ||| |||||||||||||||||
Sbjct: 45 ctcacagtggtctctgggattatgctaa 72
>32806_rno-mir-216a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgag 29
||||||||||||||||||||||
Sbjct: 20 aatctcagctggcaactgtgag 41
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 46 ctcacaatggcctctgggattatgctaa 73
|||||| ||| |||||||||||||||||
Sbjct: 57 ctcacagtggtctctgggattatgctaa 84
>33292_bta-mir-216a:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgag 29
||||||||||||||||||||||
Sbjct: 20 aatctcagctggcaactgtgag 41
>34041_ssc-mir-216:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 aatctcagctggcaactgtgag 29
||||||||||||||||||||||
Sbjct: 20 aatctcagctggcaactgtgag 41
>30291_ptr-mir-216a:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 atctcagctggcaactgtgag 29
|||||||||||||||||||||
Sbjct: 20 atctcagctggcaactgtgag 40
