miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34795_tni-mir-223:mirbase
Length = 85
Score = 111 bits (56), Expect = 8e-26
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 1 cacttagtgtatttgacaagctgttcttgacactctttatacgcgagtgtcagtttgtca 60
|||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||
Sbjct: 10 cacttagtgtatttgacaagctgtgtttgacactctgtatctgcgagtgtcagtttgtca 69
Query: 61 aataccccaagtgagg 76
||||||||||||||||
Sbjct: 70 aataccccaagtgagg 85
>25669_xla-mir-223:mirbase
Length = 86
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 45 gagtgtcagtttgtcaaataccccaagtgagg 76
||||||||||||||||||||||||||||||||
Sbjct: 52 gagtgtcagtttgtcaaataccccaagtgagg 83
>25842_xtr-mir-223:mirbase
Length = 86
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 45 gagtgtcagtttgtcaaataccccaagtgagg 76
||||||||||||||||||||||||||||||||
Sbjct: 52 gagtgtcagtttgtcaaataccccaagtgagg 83
>26013_gga-mir-223:mirbase
Length = 100
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 45 gagtgtcagtttgtcaaataccccaagtgagg 76
||||||||||||||||||||||||||||||||
Sbjct: 56 gagtgtcagtttgtcaaataccccaagtgagg 87
>26520_tgu-mir-223:mirbase
Length = 71
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 45 gagtgtcagtttgtcaaataccccaagtgagg 76
||||||||||||||||||||||||||||||||
Sbjct: 38 gagtgtcagtttgtcaaataccccaagtgagg 69
>27436_mdo-mir-223:mirbase
Length = 111
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 45 gagtgtcagtttgtcaaataccccaagtgagg 76
||||||||||||||||||||||||||||||||
Sbjct: 69 gagtgtcagtttgtcaaataccccaagtgagg 100
>26784_cfa-mir-223:mirbase
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 45 gagtgtcagtttgtcaaataccccaagtg 73
|||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtg 93
>27108_eca-mir-223:mirbase
Length = 104
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 45 gagtgtcagtttgtcaaataccccaagtg 73
|||||||||||||||||||||||||||||
Sbjct: 66 gagtgtcagtttgtcaaataccccaagtg 94
>27628_sla-mir-223:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 45 gagtgtcagtttgtcaaataccccaagtg 73
|||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtg 93
>27821_mml-mir-223:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 45 gagtgtcagtttgtcaaataccccaagtg 73
|||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtg 93
>28337_ggo-mir-223:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 45 gagtgtcagtttgtcaaataccccaagtg 73
|||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtg 93
>28544_hsa-mir-223:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 45 gagtgtcagtttgtcaaataccccaagtg 73
|||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtg 93
>30124_ppa-mir-223:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 45 gagtgtcagtttgtcaaataccccaagtg 73
|||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtg 93
>30301_ptr-mir-223:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 45 gagtgtcagtttgtcaaataccccaagtg 73
|||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtg 93
>30918_ppy-mir-223:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 45 gagtgtcagtttgtcaaataccccaagtg 73
|||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtg 93
>31953_mmu-mir-223:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 45 gagtgtcagtttgtcaaataccccaagtg 73
|||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtg 93
>32819_rno-mir-223:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 45 gagtgtcagtttgtcaaataccccaagtg 73
|||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtg 93
>31544_oan-mir-223:mirbase
Length = 124
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 45 gagtgtcagtttgtcaaataccccaagtgagg 76
||||||||||||||||||||||| ||||||||
Sbjct: 74 gagtgtcagtttgtcaaataccctaagtgagg 105
>33303_bta-mir-223:mirbase
Length = 108
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 46 agtgtcagtttgtcaaataccccaagtg 73
||||||||||||||||||||||||||||
Sbjct: 64 agtgtcagtttgtcaaataccccaagtg 91
>34384_dre-mir-223:mirbase
Length = 99
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 47 gtgtcagtttgtcaaataccccaagtgagg 76
||||||||||||||||||||||||| ||||
Sbjct: 70 gtgtcagtttgtcaaataccccaagagagg 99
