miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34661_ola-mir-430b-1:mirbase
Length = 82
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 ggacataaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctaca 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 ggacataaagatgaccttgacacaggcactgactttttcttctttgtagtaagtgctaca 60
Query: 61 tgttggggtaattttggtgt 80
||||||||||||||||||||
Sbjct: 61 tgttggggtaattttggtgt 80
>34657_ola-mir-430a-1:mirbase
Length = 82
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 1 ggacataaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctaca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggacataaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctact 60
Query: 61 tgttggggtaattttggtgt 80
|||||||||| |||||||||
Sbjct: 61 tgttggggtatttttggtgt 80
>34658_ola-mir-430a-2:mirbase
Length = 82
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 1 ggacataaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctaca 60
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggacatcaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctact 60
Query: 61 tgttggggtaattttggtgt 80
||||||||||||||||||||
Sbjct: 61 tgttggggtaattttggtgt 80
>34659_ola-mir-430a-3:mirbase
Length = 82
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 1 ggacataaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctaca 60
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggacatcaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctact 60
Query: 61 tgttggggtaattttggtgt 80
||||||||||||||||||||
Sbjct: 61 tgttggggtaattttggtgt 80
>34660_ola-mir-430a-4:mirbase
Length = 82
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 1 ggacataaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctaca 60
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggacatcaagatgaccttgacacaggcactgactctttcttctttgtagtaagtgctact 60
Query: 61 tgttggggtaattttggtgt 80
||||||||||||||||||||
Sbjct: 61 tgttggggtaattttggtgt 80
>34664_ola-mir-430c-2:mirbase
Length = 88
Score = 63.9 bits (32), Expect = 2e-11
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 9 agatgaccttgacacaggcactgactctttcttctttgtagtaagtgctacatgttgggg 68
|||||||||| ||| ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 12 agatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacatgttgggg 71
Query: 69 taattttggtgt 80
|| | |||||||
Sbjct: 72 tagtcttggtgt 83
>34667_ola-mir-430c-5:mirbase
Length = 88
Score = 63.9 bits (32), Expect = 2e-11
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 9 agatgaccttgacacaggcactgactctttcttctttgtagtaagtgctacatgttgggg 68
|||||||||| ||| ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 12 agatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacatgttgggg 71
Query: 69 taattttggtgt 80
|| | |||||||
Sbjct: 72 tagtcttggtgt 83
>34665_ola-mir-430c-3:mirbase
Length = 89
Score = 60.0 bits (30), Expect = 3e-10
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 9 agatgaccttgacacaggcactgactctttcttctttgtagtaagtgctacatgttgggg 68
|||||||||| ||| ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 12 agatgaccttaacataggcactgacttgaatttctttgcagtaagtgctacatgttgggg 71
Query: 69 ta 70
||
Sbjct: 72 ta 73
>34669_ola-mir-430c-7:mirbase
Length = 84
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 40 ttctttgtagtaagtgctacatgttggggtaattttggtgt 80
||||||| ||||||||||||||||||||||| | |||||||
Sbjct: 37 ttctttgcagtaagtgctacatgttggggtagtcttggtgt 77
>34663_ola-mir-430c-1:mirbase
Length = 86
Score = 56.0 bits (28), Expect = 4e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 41 tctttgtagtaagtgctacatgttggggtaattttggtgt 80
|||||| ||||||||||||||||||||||| | |||||||
Sbjct: 42 tctttgcagtaagtgctacatgttggggtagtcttggtgt 81
>34666_ola-mir-430c-4:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 4e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 41 tctttgtagtaagtgctacatgttggggtaattttggtgt 80
|||||| ||||||||||||||||||||||| | |||||||
Sbjct: 51 tctttgcagtaagtgctacatgttggggtagtcttggtgt 90
>34668_ola-mir-430c-6:mirbase
Length = 95
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 40 ttctttgtagtaagtgctacatgttggggta 70
||||||| |||||||||||||||||||||||
Sbjct: 48 ttctttgcagtaagtgctacatgttggggta 78
