miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34664_ola-mir-430c-2:mirbase
Length = 88
Score = 105 bits (53), Expect = 5e-24
Identities = 53/53 (100%)
Strand = Plus / Plus
Query: 30 cttgaatttctttgcagtaagtgctacatgttggggtagtcttggtgtctagc 82
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 cttgaatttctttgcagtaagtgctacatgttggggtagtcttggtgtctagc 88
>34667_ola-mir-430c-5:mirbase
Length = 88
Score = 103 bits (52), Expect = 2e-23
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 30 cttgaatttctttgcagtaagtgctacatgttggggtagtcttggtgtctag 81
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 cttgaatttctttgcagtaagtgctacatgttggggtagtcttggtgtctag 87
>34663_ola-mir-430c-1:mirbase
Length = 86
Score = 97.6 bits (49), Expect = 1e-21
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 30 cttgaatttctttgcagtaagtgctacatgttggggtagtcttggtgtctagc 82
||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 cttgaatatctttgcagtaagtgctacatgttggggtagtcttggtgtctagc 86
>34666_ola-mir-430c-4:mirbase
Length = 97
Score = 93.7 bits (47), Expect = 2e-20
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 38 tctttgcagtaagtgctacatgttggggtagtcttggtgtctagcaa 84
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 tctttgcagtaagtgctacatgttggggtagtcttggtgtctagcaa 97
>34668_ola-mir-430c-6:mirbase
Length = 95
Score = 93.7 bits (47), Expect = 2e-20
Identities = 50/51 (98%)
Strand = Plus / Plus
Query: 34 aatttctttgcagtaagtgctacatgttggggtagtcttggtgtctagcaa 84
|||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 45 aatttctttgcagtaagtgctacatgttggggtagtctgggtgtctagcaa 95
>34665_ola-mir-430c-3:mirbase
Length = 89
Score = 91.7 bits (46), Expect = 7e-20
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 30 cttgaatttctttgcagtaagtgctacatgttggggtagtcttggtgtct 79
||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 36 cttgaatttctttgcagtaagtgctacatgttggggtagtctttgtgtct 85
>34661_ola-mir-430b-1:mirbase
Length = 82
Score = 60.0 bits (30), Expect = 3e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 37 ttctttgcagtaagtgctacatgttggggtagtcttggtgtc 78
||||||| ||||||||||||||||||||||| | ||||||||
Sbjct: 40 ttctttgtagtaagtgctacatgttggggtaattttggtgtc 81
>34662_ola-mir-430b-2:mirbase
Length = 82
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 37 ttctttgcagtaagtgctacatgttggggtagtcttggtgt 77
||||||| ||||||||||||||||||||||| | |||||||
Sbjct: 40 ttctttgtagtaagtgctacatgttggggtaattttggtgt 80
>34657_ola-mir-430a-1:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 6e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 37 ttctttgcagtaagtgctacatgttggggtagtcttggtgtc 78
||||||| |||||||||||| |||||||||| | ||||||||
Sbjct: 40 ttctttgtagtaagtgctacttgttggggtatttttggtgtc 81
>34658_ola-mir-430a-2:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 6e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 37 ttctttgcagtaagtgctacatgttggggtagtcttggtgtc 78
||||||| |||||||||||| |||||||||| | ||||||||
Sbjct: 40 ttctttgtagtaagtgctacttgttggggtaattttggtgtc 81
>34659_ola-mir-430a-3:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 6e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 37 ttctttgcagtaagtgctacatgttggggtagtcttggtgtc 78
||||||| |||||||||||| |||||||||| | ||||||||
Sbjct: 40 ttctttgtagtaagtgctacttgttggggtaattttggtgtc 81
>34660_ola-mir-430a-4:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 6e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 37 ttctttgcagtaagtgctacatgttggggtagtcttggtgtc 78
||||||| |||||||||||| |||||||||| | ||||||||
Sbjct: 40 ttctttgtagtaagtgctacttgttggggtaattttggtgtc 81
