miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>34672_ola-mir-430d-3:mirbase
          Length = 87

 Score =  165 bits (83), Expect = 6e-42
 Identities = 86/87 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  gaatcgcttcgagaccatctcaaacagagacactgatggttttgatttcctaagtgcttc 60
          ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gaatcgcttcgaggccatctcaaacagagacactgatggttttgatttcctaagtgcttc 60

                                     
Query: 61 tctttggggttgtctcaatgttggttt 87
          |||||||||||||||||||||||||||
Sbjct: 61 tctttggggttgtctcaatgttggttt 87




>34671_ola-mir-430d-2:mirbase
          Length = 87

 Score =  157 bits (79), Expect = 2e-39
 Identities = 85/87 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  gaatcgcttcgagaccatctcaaacagagacactgatggttttgatttcctaagtgcttc 60
          ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gaatcgcttcgaggccacctcaaacagagacactgatggttttgatttcctaagtgcttc 60

                                     
Query: 61 tctttggggttgtctcaatgttggttt 87
          |||||||||||||||||||||||||||
Sbjct: 61 tctttggggttgtctcaatgttggttt 87




>34448_dre-mir-430c-1:mirbase
          Length = 96

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 60 taagtgcttctctttggggt 79




>34449_dre-mir-430c-10:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 45 taagtgcttctctttggggt 64




>34450_dre-mir-430c-11:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 45 taagtgcttctctttggggt 64




>34451_dre-mir-430c-12:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 45 taagtgcttctctttggggt 64




>34452_dre-mir-430c-13:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 45 taagtgcttctctttggggt 64




>34453_dre-mir-430c-14:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 45 taagtgcttctctttggggt 64




>34454_dre-mir-430c-15:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 45 taagtgcttctctttggggt 64




>34455_dre-mir-430c-16:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 45 taagtgcttctctttggggt 64




>34456_dre-mir-430c-17:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 45 taagtgcttctctttggggt 64




>34457_dre-mir-430c-18:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 45 taagtgcttctctttggggt 64




>34458_dre-mir-430c-19:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 45 taagtgcttctctttggggt 64




>34459_dre-mir-430c-2:mirbase
          Length = 79

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 48 taagtgcttctctttggggt 67




>34460_dre-mir-430c-20:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 45 taagtgcttctctttggggt 64




>34461_dre-mir-430c-21:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 45 taagtgcttctctttggggt 64




>34462_dre-mir-430c-3:mirbase
          Length = 79

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 48 taagtgcttctctttggggt 67




>34463_dre-mir-430c-4:mirbase
          Length = 79

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 48 taagtgcttctctttggggt 67




>34464_dre-mir-430c-5:mirbase
          Length = 79

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 48 taagtgcttctctttggggt 67




>34465_dre-mir-430c-6:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 45 taagtgcttctctttggggt 64




>34466_dre-mir-430c-7:mirbase
          Length = 73

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 45 taagtgcttctctttggggt 64




>34467_dre-mir-430c-8:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 45 taagtgcttctctttggggt 64




>34468_dre-mir-430c-9:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 taagtgcttctctttggggt 70
          ||||||||||||||||||||
Sbjct: 45 taagtgcttctctttggggt 64