miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34545_fru-mir-15a:mirbase
Length = 71
Score = 117 bits (59), Expect = 1e-27
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 1 ctggtgatgctgtagcagcacggaatggtttgtgagttacactgagatacaagccatgct 60
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||
Sbjct: 1 ctggtgatgctgtagcagcacggaatggtttgtgggttacactgagatacaggccatact 60
Query: 61 gtgctgccgca 71
|||||||||||
Sbjct: 61 gtgctgccgca 71
>25697_xtr-mir-15a:mirbase
Length = 83
Score = 54.0 bits (27), Expect = 1e-08
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 12 gtagcagcacggaatggtttgtgagttacactgagatacaagccatgctgtgctgccgc 70
|||||||||| ||||||||||| ||||||| ||| | || ||||| ||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtgggttacacagaggtgcaggccatactgtgctgccgc 71
>34202_dre-mir-15a-1:mirbase
Length = 84
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 10 ctgtagcagcacggaatggtttgtgagtta 39
|||||||||||| |||||||||||||||||
Sbjct: 11 ctgtagcagcacagaatggtttgtgagtta 40
>34203_dre-mir-15a-2:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 8e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 3 ggtgatgctgtagcagcacggaatggtttgtg 34
||||||| ||||||||||| ||||||||||||
Sbjct: 15 ggtgatggtgtagcagcacagaatggtttgtg 46
>25427_pma-mir-15a:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 gctgtagcagcacggaatggtttgt 33
|||||||||||||| ||||||||||
Sbjct: 4 gctgtagcagcacgtaatggtttgt 28
>31425_oan-mir-15a:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 12 gtagcagcacggaatggtttgtgagtt 38
|||||||||| |||||||||||||||
Sbjct: 20 gtagcagcacataatggtttgtgagtt 46
