miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34546_fru-mir-15b:mirbase
Length = 95
Score = 115 bits (58), Expect = 6e-27
Identities = 83/90 (92%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 2 cccttagactgctttagcagcgcatcatggtttgtaatgatgtggaaaaaaggtgcaaac 61
||||||||||||| ||||||||||||||||||||||| ||||| | |||| ||||||| |
Sbjct: 6 cccttagactgctatagcagcgcatcatggtttgtaacgatgtag-aaaagggtgcaagc 64
Query: 62 cataatttgctgctttagaattttaaggaa 91
|||||| |||||||||||||||||||||||
Sbjct: 65 cataatctgctgctttagaattttaaggaa 94
>25892_gga-mir-15b:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 66 atttgctgctttagaattttaaggaa 91
|||||||||||||||| |||||||||
Sbjct: 66 atttgctgctttagaaatttaaggaa 91
>31426_oan-mir-15b:mirbase
Length = 130
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 66 atttgctgctttagaattttaaggaa 91
|||||||||||||||| |||||||||
Sbjct: 78 atttgctgctttagaaatttaaggaa 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 3 ccttagactgctttagcagcgcatcatggtttg 35
|||| ||||||| ||||||| ||||||||||||
Sbjct: 18 ccttggactgctatagcagcacatcatggtttg 50
