miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34547_fru-mir-16:mirbase
Length = 89
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaaggctctctgtgatacctccagtattgatcgtgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 tagcagcacgtaaatattggagttaaggctctctgtgatacctccagtattgatcgtgct 72
Query: 61 gctgaagcaaag 72
||||||||||||
Sbjct: 73 gctgaagcaaag 84
>34207_dre-mir-16b:mirbase
Length = 140
Score = 56.0 bits (28), Expect = 3e-09
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaaggctctctgtgatacctccagtattgatcgtgct 60
||||||||||||||||||||||| || || || || || ||||||||||||| ||||||
Sbjct: 39 tagcagcacgtaaatattggagtcaaagcact-tgcgaatcctccagtattgaccgtgct 97
Query: 61 gctg 64
||||
Sbjct: 98 gctg 101
>31428_oan-mir-16a:mirbase
Length = 132
Score = 48.1 bits (24), Expect = 8e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaaggctct 32
|||||||||||||||||||| |||||| ||||
Sbjct: 29 tagcagcacgtaaatattggcgttaagactct 60
>25429_pma-mir-16:mirbase
Length = 75
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagt 23
|||||||||||||||||||||||
Sbjct: 10 tagcagcacgtaaatattggagt 32
>26399_tgu-mir-16a:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaag 27
|||||||||||||||||||| ||||||
Sbjct: 11 tagcagcacgtaaatattggtgttaag 37
>26400_tgu-mir-16b:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagt 23
|||||||||||||||||||||||
Sbjct: 11 tagcagcacgtaaatattggagt 33
>26625_cfa-mir-16-1:mirbase
Length = 65
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaag 27
|||||||||||||||||||| ||||||
Sbjct: 1 tagcagcacgtaaatattggcgttaag 27
>26948_eca-mir-16-2:mirbase
Length = 63
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaag 27
|||||||||||||||||||| ||||||
Sbjct: 1 tagcagcacgtaaatattggcgttaag 27
>27334_mdo-mir-16:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaag 27
|||||||||||||||||||| ||||||
Sbjct: 14 tagcagcacgtaaatattggcgttaag 40
>27480_age-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaag 27
|||||||||||||||||||| ||||||
Sbjct: 14 tagcagcacgtaaatattggcgttaag 40
>27589_sla-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaag 27
|||||||||||||||||||| ||||||
Sbjct: 14 tagcagcacgtaaatattggcgttaag 40
>27652_mml-mir-16-1:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaag 27
|||||||||||||||||||| ||||||
Sbjct: 14 tagcagcacgtaaatattggcgttaag 40
>28172_mne-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaag 27
|||||||||||||||||||| ||||||
Sbjct: 14 tagcagcacgtaaatattggcgttaag 40
>28260_ggo-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaag 27
|||||||||||||||||||| ||||||
Sbjct: 14 tagcagcacgtaaatattggcgttaag 40
>28362_hsa-mir-16-1:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaag 27
|||||||||||||||||||| ||||||
Sbjct: 14 tagcagcacgtaaatattggcgttaag 40
>30044_ppa-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaag 27
|||||||||||||||||||| ||||||
Sbjct: 14 tagcagcacgtaaatattggcgttaag 40
>30148_ptr-mir-16-1:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaag 27
|||||||||||||||||||| ||||||
Sbjct: 14 tagcagcacgtaaatattggcgttaag 40
>30753_ppy-mir-16:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaag 27
|||||||||||||||||||| ||||||
Sbjct: 14 tagcagcacgtaaatattggcgttaag 40
>31394_lca-mir-16:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaag 27
|||||||||||||||||||| ||||||
Sbjct: 14 tagcagcacgtaaatattggtgttaag 40
>31777_mmu-mir-16-1:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaag 27
|||||||||||||||||||| ||||||
Sbjct: 16 tagcagcacgtaaatattggcgttaag 42
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 39 tacctccagtattgatcgtgctgctgaag 67
||||||||||||||| ||||||||||||
Sbjct: 53 tacctccagtattgactgtgctgctgaag 81
>33130_bta-mir-16a:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaag 27
|||||||||||||||||||| ||||||
Sbjct: 14 tagcagcacgtaaatattggtgttaag 40
>33914_ssc-mir-16-2:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaag 27
|||||||||||||||||||| ||||||
Sbjct: 9 tagcagcacgtaaatattggcgttaag 35
>25700_xtr-mir-16a:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaa 26
|||||||||||||||||||| |||||
Sbjct: 14 tagcagcacgtaaatattggtgttaa 39
>25894_gga-mir-16-1:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagttaa 26
|||||||||||||||||||| |||||
Sbjct: 14 tagcagcacgtaaatattggtgttaa 39
>34208_dre-mir-16c:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 41 cctccagtattgatcgtgctgctgaagcaa 70
|||||| ||||| |||||||||||||||||
Sbjct: 74 cctccaatattgctcgtgctgctgaagcaa 103
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagtta 25
|||||||| ||||||||||||||||
Sbjct: 35 tagcagcatgtaaatattggagtta 59
>25701_xtr-mir-16b:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattgg 33
>25702_xtr-mir-16c:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagtt 24
|||||||||||||||| |||||||
Sbjct: 3 tagcagcacgtaaatactggagtt 26
>25895_gga-mir-16-2:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 17 tagcagcacgtaaatattgg 36
>26401_tgu-mir-16c:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagtt 24
|||||||||||||||| |||||||
Sbjct: 11 tagcagcacgtaaatactggagtt 34
>26626_cfa-mir-16-2:mirbase
Length = 65
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 1 tagcagcacgtaaatattgg 20
>26947_eca-mir-16:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 10 tagcagcacgtaaatattgg 29
>27541_lla-mir-16:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 14 tagcagcacgtaaatattgg 33
>27653_mml-mir-16-2:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 10 tagcagcacgtaaatattgg 29
>28363_hsa-mir-16-2:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 10 tagcagcacgtaaatattgg 29
>30149_ptr-mir-16-2:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 9 tagcagcacgtaaatattgg 28
>30754_ppy-mir-16-2:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 10 tagcagcacgtaaatattgg 29
>31429_oan-mir-16b:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 21 tagcagcacgtaaatattgg 40
>31430_oan-mir-16c:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagtt 24
|||||||||||||||| |||||||
Sbjct: 28 tagcagcacgtaaatactggagtt 51
>31778_mmu-mir-16-2:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 17 tagcagcacgtaaatattgg 36
>32659_rno-mir-16:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 17 tagcagcacgtaaatattgg 36
>33131_bta-mir-16b:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 17 tagcagcacgtaaatattgg 36
>33913_ssc-mir-16-1:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 8 tagcagcacgtaaatattgg 27
>34206_dre-mir-16a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattgg 20
||||||||||||||||||||
Sbjct: 13 tagcagcacgtaaatattgg 32
>25896_gga-mir-16c:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tagcagcacgtaaatattggagt 23
|||||||||||||||| ||||||
Sbjct: 5 tagcagcacgtaaatactggagt 27
