miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34881_sko-mir-137:mirbase
Length = 101
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 39 cctgatgttattgcttgagaatacacgtag 68
||||||||||||||||||||||||||||||
Sbjct: 53 cctgatgttattgcttgagaatacacgtag 82
>38754_cte-mir-137:mirbase
Length = 101
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 gatgttattgcttgagaatacacgtag 68
|||||||||||||||||||||||||||
Sbjct: 56 gatgttattgcttgagaatacacgtag 82
>35540_bmo-mir-137:mirbase
Length = 90
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 gatgttattgcttgagaatacacgtag 68
|||||||||||||||||||||||||||
Sbjct: 51 gatgttattgcttgagaatacacgtag 77
>36391_dme-mir-137:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atgttattgcttgagaatacacgtagt 69
|||||||||||||||||||||||||||
Sbjct: 50 atgttattgcttgagaatacacgtagt 76
>36392_dme-mir-137:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atgttattgcttgagaatacacgtagt 69
|||||||||||||||||||||||||||
Sbjct: 50 atgttattgcttgagaatacacgtagt 76
>36936_dps-mir-137:mirbase
Length = 111
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atgttattgcttgagaatacacgtagt 69
|||||||||||||||||||||||||||
Sbjct: 61 atgttattgcttgagaatacacgtagt 87
>37223_dsi-mir-137:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atgttattgcttgagaatacacgtagt 69
|||||||||||||||||||||||||||
Sbjct: 61 atgttattgcttgagaatacacgtagt 87
>37745_tca-mir-137:mirbase
Length = 77
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 gatgttattgcttgagaatacacgtag 68
|||||||||||||||||||||||||||
Sbjct: 44 gatgttattgcttgagaatacacgtag 70
>37746_tca-mir-137:mirbase
Length = 77
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 42 gatgttattgcttgagaatacacgtag 68
|||||||||||||||||||||||||||
Sbjct: 44 gatgttattgcttgagaatacacgtag 70
>35064_api-mir-137:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgttattgcttgagaatacacgtagt 69
||||||||||||||||||||||||||
Sbjct: 49 tgttattgcttgagaatacacgtagt 74
>35194_aae-mir-137-1:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgttattgcttgagaatacacgtagt 69
||||||||||||||||||||||||||
Sbjct: 60 tgttattgcttgagaatacacgtagt 85
>35195_aae-mir-137-2:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgttattgcttgagaatacacgtagt 69
||||||||||||||||||||||||||
Sbjct: 62 tgttattgcttgagaatacacgtagt 87
>35292_aga-mir-137:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgttattgcttgagaatacacgtagt 69
||||||||||||||||||||||||||
Sbjct: 52 tgttattgcttgagaatacacgtagt 77
>35370_ame-mir-137:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgttattgcttgagaatacacgtagt 69
||||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgtagt 83
>36024_cqu-mir-137:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgttattgcttgagaatacacgtagt 69
||||||||||||||||||||||||||
Sbjct: 50 tgttattgcttgagaatacacgtagt 75
>37580_ngi-mir-137:mirbase
Length = 83
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgttattgcttgagaatacacgtagt 69
||||||||||||||||||||||||||
Sbjct: 47 tgttattgcttgagaatacacgtagt 72
>37612_nlo-mir-137:mirbase
Length = 83
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgttattgcttgagaatacacgtagt 69
||||||||||||||||||||||||||
Sbjct: 47 tgttattgcttgagaatacacgtagt 72
>37652_nvi-mir-137:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tgttattgcttgagaatacacgtagt 69
||||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgtagt 83
>38869_lgi-mir-137:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tgttattgcttgagaatacacgta 67
||||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgta 81
>34747_tni-mir-137:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 42 gatgttattgcttgagaatacacgtagt 69
||||||||||||||||||||| ||||||
Sbjct: 39 gatgttattgcttgagaatacgcgtagt 66
>35013_dpu-mir-137:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 44 tgttattgcttgagaatacacgtagtat 71
||||||||||||||||||||||| ||||
Sbjct: 58 tgttattgcttgagaatacacgttgtat 85
>34973_isc-mir-137:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 tgttattgcttgagaatacacgt 66
|||||||||||||||||||||||
Sbjct: 58 tgttattgcttgagaatacacgt 80
>31494_oan-mir-137b:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 44 tgttattgcttgagaatacacgtagt 69
||||||||||||||||||| ||||||
Sbjct: 51 tgttattgcttgagaatacgcgtagt 76
>34952_xbo-mir-137:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 tgatgttattgcttgagaatacacgt 66
|||| |||||||||||||||||||||
Sbjct: 48 tgatattattgcttgagaatacacgt 73
>24683_bfl-mir-137:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 ttattgcttgagaatacacgt 66
|||||||||||||||||||||
Sbjct: 60 ttattgcttgagaatacacgt 80
>25489_pma-mir-137-1:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 44 tgttattgcttgagaatacacgtag 68
||||||||||| |||||||||||||
Sbjct: 51 tgttattgcttaagaatacacgtag 75
>25490_pma-mir-137-2:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 44 tgttattgcttgagaatacacgtag 68
||||||||||| |||||||||||||
Sbjct: 51 tgttattgcttaagaatacacgtag 75
>38117_bma-mir-137:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 44 tgttattgcttgagaataca 63
||||||||||||||||||||
Sbjct: 53 tgttattgcttgagaataca 72
