miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34882_sko-mir-153:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgattggga 86
||||||||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgattggga 86
>25801_xtr-mir-153-2:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgatt 82
||||||||||||||||||||||||
Sbjct: 51 agttgcatagtcacaaaagtgatt 74
>25501_pma-mir-153-1:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 45 agttgcatagtcacaaaagtgat 67
>25502_pma-mir-153-2:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 45 agttgcatagtcacaaaagtgat 67
>25503_pma-mir-153-3:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 47 agttgcatagtcacaaaagtgat 69
>25800_xtr-mir-153-1:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 51 agttgcatagtcacaaaagtgat 73
>25972_gga-mir-153:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 51 agttgcatagtcacaaaagtgat 73
>26480_tgu-mir-153-1:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 39 agttgcatagtcacaaaagtgat 61
>26481_tgu-mir-153-2:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 39 agttgcatagtcacaaaagtgat 61
>26729_cfa-mir-153:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 51 agttgcatagtcacaaaagtgat 73
>27056_eca-mir-153:mirbase
Length = 67
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 40 agttgcatagtcacaaaagtgat 62
>27057_eca-mir-153-2:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 42 agttgcatagtcacaaaagtgat 64
>27401_mdo-mir-153-1:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 52 agttgcatagtcacaaaagtgat 74
>27402_mdo-mir-153-2:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 51 agttgcatagtcacaaaagtgat 73
>27763_mml-mir-153-1:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 52 agttgcatagtcacaaaagtgat 74
>27764_mml-mir-153-2:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 51 agttgcatagtcacaaaagtgat 73
>28218_mne-mir-153-1:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 52 agttgcatagtcacaaaagtgat 74
>28219_mne-mir-153-2:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 51 agttgcatagtcacaaaagtgat 73
>28311_ggo-mir-153:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 51 agttgcatagtcacaaaagtgat 73
>28480_hsa-mir-153-2:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 51 agttgcatagtcacaaaagtgat 73
>28479_hsa-mir-153-1:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 52 agttgcatagtcacaaaagtgat 74
>30248_ptr-mir-153:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 51 agttgcatagtcacaaaagtgat 73
>30861_ppy-mir-153:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 52 agttgcatagtcacaaaagtgat 74
>30862_ppy-mir-153-2:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 51 agttgcatagtcacaaaagtgat 73
>31508_oan-mir-153:mirbase
Length = 145
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 94 agttgcatagtcacaaaagtgat 116
>31889_mmu-mir-153:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 42 agttgcatagtcacaaaagtgat 64
>32760_rno-mir-153:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 51 agttgcatagtcacaaaagtgat 73
>33240_bta-mir-153-1:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 52 agttgcatagtcacaaaagtgat 74
>33241_bta-mir-153-2:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 51 agttgcatagtcacaaaagtgat 73
>34004_ssc-mir-153:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 51 agttgcatagtcacaaaagtgat 73
>34324_dre-mir-153a:mirbase
Length = 81
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 48 agttgcatagtcacaaaagtgat 70
>34608_fru-mir-153a:mirbase
Length = 71
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 43 agttgcatagtcacaaaagtgat 65
>34755_tni-mir-153a:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agttgcatagtcacaaaagtgat 81
|||||||||||||||||||||||
Sbjct: 44 agttgcatagtcacaaaagtgat 66
>38870_lgi-mir-153:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgat 81
>38755_cte-mir-153:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgat 81
>34974_isc-mir-153:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgat 81
>35014_dpu-mir-153:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgat 81
>38118_bma-mir-153:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgcatagtcacaaaagtgat 81
|||||||||||||||||||||
Sbjct: 50 ttgcatagtcacaaaagtgat 70
>24838_cin-mir-153:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 58 tagttgcatagtcacaaaagtgat 81
|||||||||||| |||||||||||
Sbjct: 63 tagttgcatagtaacaaaagtgat 86
