miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36112_dan-mir-219:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgttgaatt 50
||||||||| ||||||||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgttgaatt 48
>24698_bfl-mir-219:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgttga 47
||||||||| |||||||||||||||||
Sbjct: 8 tgattgtccaaacgcaattcttgttga 34
>36190_der-mir-219:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgttga 47
||||||||| |||||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgttga 45
>36279_dgr-mir-219:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgttga 47
||||||||| |||||||||||||||||
Sbjct: 18 tgattgtccaaacgcaattcttgttga 44
>36401_dme-mir-219:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgttga 47
||||||||| |||||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgttga 45
>36402_dme-mir-219:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgttga 47
||||||||| |||||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgttga 45
>36788_dmo-mir-219:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgttga 47
||||||||| |||||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgttga 45
>36864_dpe-mir-219:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgttga 47
||||||||| |||||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgttga 45
>36942_dps-mir-219:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgttga 47
||||||||| |||||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgttga 45
>37150_dse-mir-219:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgttga 47
||||||||| |||||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgttga 45
>37228_dsi-mir-219:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgttga 47
||||||||| |||||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgttga 45
>37364_dvi-mir-219:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgttga 47
||||||||| |||||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgttga 45
>37443_dwi-mir-219:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgttga 47
||||||||| |||||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgttga 45
>37518_dya-mir-219:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgttga 47
||||||||| |||||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgttga 45
>38766_cte-mir-219:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ttgattgtccgaacgcaattcttgtt 45
|||||||||| |||||||||||||||
Sbjct: 18 ttgattgtccaaacgcaattcttgtt 43
>25839_xtr-mir-219:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ttgattgtccgaacgcaattcttgtt 45
|||||||||| |||||||||||||||
Sbjct: 16 ttgattgtccaaacgcaattcttgtt 41
>34378_dre-mir-219-1:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 ttgattgtccgaacgcaattcttgt 44
|||||||||| ||||||||||||||
Sbjct: 14 ttgattgtccaaacgcaattcttgt 38
>35070_api-mir-219:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgtt 45
||||||||| |||||||||||||||
Sbjct: 11 tgattgtccaaacgcaattcttgtt 35
>35200_aae-mir-219:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgtt 45
||||||||| |||||||||||||||
Sbjct: 11 tgattgtccaaacgcaattcttgtt 35
>37755_tca-mir-219:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgtt 45
||||||||| |||||||||||||||
Sbjct: 11 tgattgtccaaacgcaattcttgtt 35
>37756_tca-mir-219:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgtt 45
||||||||| |||||||||||||||
Sbjct: 11 tgattgtccaaacgcaattcttgtt 35
>26009_gga-mir-219:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 10 tgattgtccaaacgcaattcttgt 33
>26355_gga-mir-2964:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 77 tgattgtccaaacgcaattcttgt 54
>26516_tgu-mir-219:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 11 tgattgtccaaacgcaattcttgt 34
>26565_tgu-mir-2964:mirbase
Length = 158
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 115 tgattgtccaaacgcaattcttgt 92
>26781_cfa-mir-219-2:mirbase
Length = 65
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 1 tgattgtccaaacgcaattcttgt 24
>27105_eca-mir-219-2:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgt 42
>27433_mdo-mir-219:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 16 tgattgtccaaacgcaattcttgt 39
>27817_mml-mir-219-2:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgt 42
>27818_mml-mir-219-2:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgt 42
>28540_hsa-mir-219-2:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgt 42
>28541_hsa-mir-219-2:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgt 42
>29224_hsa-mir-2964a:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 76 tgattgtccaaacgcaattcttgt 53
>29225_hsa-mir-2964a:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 76 tgattgtccaaacgcaattcttgt 53
>30298_ptr-mir-219-2:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgt 42
>30299_ptr-mir-219-2:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgt 42
>30915_ppy-mir-219-2:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgt 42
>31540_oan-mir-219:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 31 tgattgtccaaacgcaattcttgt 54
>31949_mmu-mir-219-2:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgt 42
>31950_mmu-mir-219-2:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgt 42
>32815_rno-mir-219-2:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgt 42
>32816_rno-mir-219-2:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgt 42
>33020_rno-mir-2964:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 81 tgattgtccaaacgcaattcttgt 58
>33297_bta-mir-219-1:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgt 42
>33298_bta-mir-219-1:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 19 tgattgtccaaacgcaattcttgt 42
>33299_bta-mir-219-2:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 13 tgattgtccaaacgcaattcttgt 36
>33300_bta-mir-219-2:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 13 tgattgtccaaacgcaattcttgt 36
>34379_dre-mir-219-2:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 1 tgattgtccaaacgcaattcttgt 24
>34380_dre-mir-219-3:mirbase
Length = 150
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 49 tgattgtccaaacgcaattcttgt 72
>34643_fru-mir-219-1:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 1 tgattgtccaaacgcaattcttgt 24
>34791_tni-mir-219-1:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 17 tgattgtccaaacgcaattcttgt 40
>34976_isc-mir-219:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 21 tgattgtccaaacgcaattcttgt 44
>35016_dpu-mir-219:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 21 tgattgtccaaacgcaattcttgt 44
>35296_aga-mir-219:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 11 tgattgtccaaacgcaattcttgt 34
>35375_ame-mir-219:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 20 tgattgtccaaacgcaattcttgt 43
>37583_ngi-mir-219:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 13 tgattgtccaaacgcaattcttgt 36
>37614_nlo-mir-219:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 13 tgattgtccaaacgcaattcttgt 36
>37656_nvi-mir-219:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgattgtccgaacgcaattcttgt 44
||||||||| ||||||||||||||
Sbjct: 20 tgattgtccaaacgcaattcttgt 43
