miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34821_spu-mir-96:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 5 tttggcactagcacattttgctgt 28
||||||||||||||||||||||||
Sbjct: 10 tttggcactagcacattttgctgt 33
>34969_isc-mir-96:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tttttggcactagcacatttt 23
|||||||||||||||||||||
Sbjct: 19 tttttggcactagcacatttt 39
>26671_cfa-mir-96:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttttggcactagcacatttt 23
||||||||||||||||||||
Sbjct: 13 ttttggcactagcacatttt 32
>26993_eca-mir-96:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttttggcactagcacatttt 23
||||||||||||||||||||
Sbjct: 8 ttttggcactagcacatttt 27
>27363_mdo-mir-96:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttttggcactagcacatttt 23
||||||||||||||||||||
Sbjct: 18 ttttggcactagcacatttt 37
>27609_sla-mir-96:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttttggcactagcacatttt 23
||||||||||||||||||||
Sbjct: 8 ttttggcactagcacatttt 27
>27700_mml-mir-96:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttttggcactagcacatttt 23
||||||||||||||||||||
Sbjct: 8 ttttggcactagcacatttt 27
>28200_mne-mir-96:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttttggcactagcacatttt 23
||||||||||||||||||||
Sbjct: 8 ttttggcactagcacatttt 27
>28290_ggo-mir-96:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttttggcactagcacatttt 23
||||||||||||||||||||
Sbjct: 8 ttttggcactagcacatttt 27
>28410_hsa-mir-96:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttttggcactagcacatttt 23
||||||||||||||||||||
Sbjct: 8 ttttggcactagcacatttt 27
>30077_ppa-mir-96:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttttggcactagcacatttt 23
||||||||||||||||||||
Sbjct: 8 ttttggcactagcacatttt 27
>30194_ptr-mir-96:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttttggcactagcacatttt 23
||||||||||||||||||||
Sbjct: 8 ttttggcactagcacatttt 27
>30800_ppy-mir-96:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttttggcactagcacatttt 23
||||||||||||||||||||
Sbjct: 8 ttttggcactagcacatttt 27
>31468_oan-mir-96:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttttggcactagcacatttt 23
||||||||||||||||||||
Sbjct: 23 ttttggcactagcacatttt 42
>31823_mmu-mir-96:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttttggcactagcacatttt 23
||||||||||||||||||||
Sbjct: 23 ttttggcactagcacatttt 42
>32704_rno-mir-96:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttttggcactagcacatttt 23
||||||||||||||||||||
Sbjct: 23 ttttggcactagcacatttt 42
>34260_dre-mir-96:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttttggcactagcacatttt 23
||||||||||||||||||||
Sbjct: 23 ttttggcactagcacatttt 42
>34578_fru-mir-96:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttttggcactagcacatttt 23
||||||||||||||||||||
Sbjct: 15 ttttggcactagcacatttt 34
>34725_tni-mir-96:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 ttttggcactagcacatttt 23
||||||||||||||||||||
Sbjct: 8 ttttggcactagcacatttt 27
