miRNEST 2.0, an integrative microRNA resource :: BLAST
>40729_mtr-MIR398b:mirbase
Length = 87
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 95 tcatgtgttctcaggtcgcccctgctgaa 123
|||||||||||||||||||||||||||||
Sbjct: 59 tcatgtgttctcaggtcgcccctgctgaa 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 16 ttctacagggtcgtcctgagaccacatgaa 45
||||||||||||| | ||||||||||||||
Sbjct: 1 ttctacagggtcgacatgagaccacatgaa 30
>41667_vvi-MIR398c:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 95 tcatgtgttctcaggtcgcccctgctg 121
|||||||||||||||||||||||||||
Sbjct: 55 tcatgtgttctcaggtcgcccctgctg 81
>41666_vvi-MIR398b:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 95 tcatgtgttctcaggtcgcccctgctg 121
|||||||||||||||||||||||||||
Sbjct: 55 tcatgtgttctcaggtcgcccctgctg 81
>41446_ptc-MIR398b:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 94 ttcatgtgttctcaggtcgcccctgc 119
||||||||||||||||||||||||||
Sbjct: 52 ttcatgtgttctcaggtcgcccctgc 77
>40730_mtr-MIR398c:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 98 tgtgttctcaggtcgcccctgctgaa 123
||||||||||||||||||||||||||
Sbjct: 62 tgtgttctcaggtcgcccctgctgaa 87
>40382_rco-MIR398b:mirbase
Length = 126
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 94 ttcatgtgttctcaggtcgcccctgc 119
||||||||||||||||||||||||||
Sbjct: 97 ttcatgtgttctcaggtcgcccctgc 122
>40091_ath-MIR398c:mirbase
Length = 115
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 94 ttcatgtgttctcaggtcgcccctgctga 122
|||||||||||||||||| ||||||||||
Sbjct: 81 ttcatgtgttctcaggtcacccctgctga 109
>40090_ath-MIR398b:mirbase
Length = 116
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 94 ttcatgtgttctcaggtcgcccctgctga 122
|||||||||||||||||| ||||||||||
Sbjct: 82 ttcatgtgttctcaggtcacccctgctga 110
>39882_aly-MIR398b:mirbase
Length = 142
Score = 50.1 bits (25), Expect = 4e-07
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 96 catgtgttctcaggtcgcccctgctgaact-tttctctacc 135
|||||||||||||||| |||||||||| || ||||||||||
Sbjct: 89 catgtgttctcaggtcacccctgctgagctctttctctacc 129
>41447_ptc-MIR398c:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 96 catgtgttctcaggtcgcccctgc 119
||||||||||||||||||||||||
Sbjct: 66 catgtgttctcaggtcgcccctgc 89
>41191_aqc-MIR398b:mirbase
Length = 93
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 96 catgtgttctcaggtcgcccctgc 119
||||||||||||||||||||||||
Sbjct: 70 catgtgttctcaggtcgcccctgc 93
>42645_tae-MIR398:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 95 tcatgtgttctcaggtcgcccctgctg 121
|||||||||||||||||||||| ||||
Sbjct: 82 tcatgtgttctcaggtcgcccccgctg 108
>41801_bdi-MIR398c:mirbase
Length = 131
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 96 catgtgttctcaggtcgcccctg 118
|||||||||||||||||||||||
Sbjct: 85 catgtgttctcaggtcgcccctg 107
>41799_bdi-MIR398a:mirbase
Length = 150
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 96 catgtgttctcaggtcgcccctg 118
|||||||||||||||||||||||
Sbjct: 94 catgtgttctcaggtcgcccctg 116
>41144_tcc-MIR398a:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 97 atgtgttctcaggtcgcccctgc 119
|||||||||||||||||||||||
Sbjct: 84 atgtgttctcaggtcgcccctgc 106
>42040_osa-MIR398b:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 98 tgtgttctcaggtcgcccctgc 119
||||||||||||||||||||||
Sbjct: 58 tgtgttctcaggtcgcccctgc 79
>42818_zma-MIR398b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 catgtgttctcaggtcgcccc 116
|||||||||||||||||||||
Sbjct: 85 catgtgttctcaggtcgcccc 105
>42817_zma-MIR398a:mirbase
Length = 140
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 catgtgttctcaggtcgcccc 116
|||||||||||||||||||||
Sbjct: 117 catgtgttctcaggtcgcccc 137
>42588_sbi-MIR398:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 catgtgttctcaggtcgcccc 116
|||||||||||||||||||||
Sbjct: 86 catgtgttctcaggtcgcccc 106
