miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37758_tca-mir-252a:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 19 tactaagtactagtgccgcaggagt 43
|||||||||||||||||||||||||
Sbjct: 15 tactaagtactagtgccgcaggagt 39
>37757_tca-mir-252a:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 19 tactaagtactagtgccgcaggagt 43
|||||||||||||||||||||||||
Sbjct: 15 tactaagtactagtgccgcaggagt 39
>38768_cte-mir-252a:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 ccaatactaagtactagtgccgcaggag 42
||||| ||||||||||||||||||||||
Sbjct: 15 ccaatgctaagtactagtgccgcaggag 42
>35201_aae-mir-252:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 19 tactaagtactagtgccgcaggag 42
||||||||||||||||||||||||
Sbjct: 9 tactaagtactagtgccgcaggag 32
>36029_cqu-mir-252:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 19 tactaagtactagtgccgcaggag 42
||||||||||||||||||||||||
Sbjct: 9 tactaagtactagtgccgcaggag 32
>36403_dme-mir-252:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 ctaagtactagtgccgcaggagt 43
|||||||||||||||||||||||
Sbjct: 16 ctaagtactagtgccgcaggagt 38
>36404_dme-mir-252:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 ctaagtactagtgccgcaggagt 43
|||||||||||||||||||||||
Sbjct: 16 ctaagtactagtgccgcaggagt 38
>36943_dps-mir-252:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 ctaagtactagtgccgcaggagt 43
|||||||||||||||||||||||
Sbjct: 21 ctaagtactagtgccgcaggagt 43
>37229_dsi-mir-252:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 ctaagtactagtgccgcaggagt 43
|||||||||||||||||||||||
Sbjct: 30 ctaagtactagtgccgcaggagt 52
>37584_ngi-mir-252:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 ctaagtactagtgccgcaggagt 43
|||||||||||||||||||||||
Sbjct: 16 ctaagtactagtgccgcaggagt 38
>37615_nlo-mir-252:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 ctaagtactagtgccgcaggagt 43
|||||||||||||||||||||||
Sbjct: 16 ctaagtactagtgccgcaggagt 38
>37657_nvi-mir-252:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 ctaagtactagtgccgcaggagt 43
|||||||||||||||||||||||
Sbjct: 16 ctaagtactagtgccgcaggagt 38
>35376_ame-mir-252:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 taagtactagtgccgcaggagt 43
||||||||||||||||||||||
Sbjct: 17 taagtactagtgccgcaggagt 38
>35544_bmo-mir-252:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 ctaagtactagtgccgcaggag 42
||||||||||||||||||||||
Sbjct: 16 ctaagtactagtgccgcaggag 37
>24700_bfl-mir-252a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ctaagtactagtgccgcagg 40
||||||||||||||||||||
Sbjct: 21 ctaagtactagtgccgcagg 40
