miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>25543_pma-mir-375a:mirbase
          Length = 94

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 51 cgctttgttcgttcggctcgcg 72
          ||||||||||||||||||||||
Sbjct: 56 cgctttgttcgttcggctcgcg 77

>24704_bfl-mir-375:mirbase
          Length = 101

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 49 aacgctttgttcgttcggctcgcg 72
          |||| |||||||||||||||||||
Sbjct: 56 aacgttttgttcgttcggctcgcg 79

>25853_xtr-mir-375:mirbase
          Length = 70

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 49 aacgctttgttcgttcggctcgcg 72
          |||| |||||||||||||||||||
Sbjct: 36 aacgttttgttcgttcggctcgcg 59

>26024_gga-mir-375:mirbase
          Length = 65

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 49 aacgctttgttcgttcggctcgcg 72
          |||| |||||||||||||||||||
Sbjct: 36 aacgttttgttcgttcggctcgcg 59

>26528_tgu-mir-375:mirbase
          Length = 72

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 49 aacgctttgttcgttcggctcgcg 72
          |||| |||||||||||||||||||
Sbjct: 36 aacgttttgttcgttcggctcgcg 59