miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40434_gma-MIR159c:mirbase
          Length = 185

 Score =  206 bits (104), Expect = 4e-54
 Identities = 161/180 (89%)
 Strand = Plus / Plus

                                                                       
Query: 6   caagttggagctctctgcactccagtgttgaaggaggtgatggtaaaccctagctgctaa 65
           |||||||||||||||| |||||||    ||||||| |||| |||| ||||| ||||||||
Sbjct: 4   caagttggagctctctacactccaagtctgaaggaagtgacggtagacccttgctgctaa 63

                                                                       
Query: 66  ttcatggttacctttggcttcccataaggaagcatgtgaaagtcatgggtttacatgaat 125
           ||||||||||||||||| |||  ||||||||||||||||||||||||||| | |||||||
Sbjct: 64  ttcatggttacctttggattcagataaggaagcatgtgaaagtcatgggtctgcatgaat 123

                                                                       
Query: 126 atggagacggggttgccttgatcttttggtattggagtgaagggagctccgaattaggcc 185
            || |||||||| | |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 124 ttgaagacggggctaccttgatcttttagtattggagtgaagggagctccgaattaggcc 183




>40433_gma-MIR159b:mirbase
          Length = 186

 Score = 69.9 bits (35), Expect = 6e-13
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                              
Query: 141 ccttgatcttttggtattggagtgaagggagctcc 175
           |||||||||||||||||||||||||||||||||||
Sbjct: 141 ccttgatcttttggtattggagtgaagggagctcc 175




>41303_ptc-MIR159e:mirbase
          Length = 192

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                    
Query: 136 ggttgccttgatctttt-ggtattggagtgaagggagctcc 175
           ||||||||||||||||| ||| |||| ||||||||||||||
Sbjct: 142 ggttgccttgatctttttggtcttggggtgaagggagctcc 182




>41570_vvi-MIR159a:mirbase
          Length = 194

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 37/40 (92%), Gaps = 1/40 (2%)
 Strand = Plus / Plus

                                                   
Query: 136 ggttgccttgatcttt-tggtattggagtgaagggagctc 174
           |||||||||||||||| |||  ||||||||||||||||||
Sbjct: 143 ggttgccttgatctttctggccttggagtgaagggagctc 182




>41304_ptc-MIR159f:mirbase
          Length = 201

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 148 cttttggtattggagtgaagggagctc 174
           ||||| |||||||||||||||||||||
Sbjct: 165 ctttttgtattggagtgaagggagctc 191